agentsclimarketplace

Architecture & codebase

12,994 rows, by stacks then stars

1,109 of these skill files have been read, by 811 distinct authors, and what they tell an agent counted. What Architecture & codebase authors agree on, and what they forbid

  • Workflow interoperability and translation starter

    ma-compbio-lab/SkillFoundry/skills/reproducible-workflows/workflow-interoperability-and-translation-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Active learning experiment loops starter

    ma-compbio-lab/SkillFoundry/skills/robotics-lab-automation-and-scientific-instrumentation/active-learning-experiment-loops-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Automated microscopy acquisition starter

    ma-compbio-lab/SkillFoundry/skills/robotics-lab-automation-and-scientific-instrumentation/automated-microscopy-acquisition-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Autoprotocol experiment plan starter

    ma-compbio-lab/SkillFoundry/skills/robotics-lab-automation-and-scientific-instrumentation/autoprotocol-experiment-plan-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Closed loop optimization for experiments starter

    ma-compbio-lab/SkillFoundry/skills/robotics-lab-automation-and-scientific-instrumentation/closed-loop-optimization-for-experiments-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Eln lims sample tracking integration starter

    ma-compbio-lab/SkillFoundry/skills/robotics-lab-automation-and-scientific-instrumentation/eln-lims-sample-tracking-integration-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Laboratory robotics safety and monitoring starter

    ma-compbio-lab/SkillFoundry/skills/robotics-lab-automation-and-scientific-instrumentation/laboratory-robotics-safety-and-monitoring-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Opentrons liquid handling protocol starter

    ma-compbio-lab/SkillFoundry/skills/robotics-lab-automation-and-scientific-instrumentation/opentrons-liquid-handling-protocol-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Qcodes parameter sweep starter

    ma-compbio-lab/SkillFoundry/skills/robotics-lab-automation-and-scientific-instrumentation/qcodes-parameter-sweep-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Code generation agents for scientific tasks starter

    ma-compbio-lab/SkillFoundry/skills/scientific-agents-and-automation/code-generation-agents-for-scientific-tasks-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Inspect evaluation harness starter

    ma-compbio-lab/SkillFoundry/skills/scientific-agents-and-automation/inspect-evaluation-harness-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Langgraph planning execution agent starter

    ma-compbio-lab/SkillFoundry/skills/scientific-agents-and-automation/langgraph-planning-execution-agent-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Literature to hypothesis agents starter

    ma-compbio-lab/SkillFoundry/skills/scientific-agents-and-automation/literature-to-hypothesis-agents-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Long horizon agent memory and provenance starter

    ma-compbio-lab/SkillFoundry/skills/scientific-agents-and-automation/long-horizon-agent-memory-and-provenance-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Skill registry router starter

    ma-compbio-lab/SkillFoundry/skills/scientific-agents-and-automation/skill-registry-router-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Tool using analysis agents starter

    ma-compbio-lab/SkillFoundry/skills/scientific-agents-and-automation/tool-using-analysis-agents-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Workflow generation agents starter

    ma-compbio-lab/SkillFoundry/skills/scientific-agents-and-automation/workflow-generation-agents-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Automatic differentiation for scientific models starter

    ma-compbio-lab/SkillFoundry/skills/scientific-computing-and-numerical-methods/automatic-differentiation-for-scientific-models-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Chaospy uncertainty propagation starter

    ma-compbio-lab/SkillFoundry/skills/scientific-computing-and-numerical-methods/chaospy-uncertainty-propagation-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Differentiable programming for simulators starter

    ma-compbio-lab/SkillFoundry/skills/scientific-computing-and-numerical-methods/differentiable-programming-for-simulators-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Fipy diffusion pde starter

    ma-compbio-lab/SkillFoundry/skills/scientific-computing-and-numerical-methods/fipy-diffusion-pde-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Inverse problems and data assimilation starter

    ma-compbio-lab/SkillFoundry/skills/scientific-computing-and-numerical-methods/inverse-problems-and-data-assimilation-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Numerical benchmarking and verification starter

    ma-compbio-lab/SkillFoundry/skills/scientific-computing-and-numerical-methods/numerical-benchmarking-and-verification-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Scipy ode simulation starter

    ma-compbio-lab/SkillFoundry/skills/scientific-computing-and-numerical-methods/scipy-ode-simulation-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Sparse iterative linear algebra starter

    ma-compbio-lab/SkillFoundry/skills/scientific-computing-and-numerical-methods/sparse-iterative-linear-algebra-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Benchmark table mining starter

    ma-compbio-lab/SkillFoundry/skills/scientific-knowledge/benchmark-table-mining-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Claim assumption limitation extraction starter

    ma-compbio-lab/SkillFoundry/skills/scientific-knowledge/claim-assumption-limitation-extraction-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Dataset code link extraction starter

    ma-compbio-lab/SkillFoundry/skills/scientific-knowledge/dataset-code-link-extraction-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Figure table caption extraction starter

    ma-compbio-lab/SkillFoundry/skills/scientific-knowledge/figure-table-caption-extraction-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Openalex citation chain starter

    ma-compbio-lab/SkillFoundry/skills/scientific-knowledge/openalex-citation-chain-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Protocol and workflow extraction starter

    ma-compbio-lab/SkillFoundry/skills/scientific-knowledge/protocol-and-workflow-extraction-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Reproducibility cue extraction starter

    ma-compbio-lab/SkillFoundry/skills/scientific-knowledge/reproducibility-cue-extraction-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Scientific summarization starter

    ma-compbio-lab/SkillFoundry/skills/scientific-knowledge/scientific-summarization-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Semantic scholar paper triage starter

    ma-compbio-lab/SkillFoundry/skills/scientific-knowledge/semantic-scholar-paper-triage-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Semantic scholar review paper mining starter

    ma-compbio-lab/SkillFoundry/skills/scientific-knowledge/semantic-scholar-review-paper-mining-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Active learning starter

    ma-compbio-lab/SkillFoundry/skills/statistical-and-machine-learning-foundations-for-science/active-learning-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Arviz posterior diagnostics starter

    ma-compbio-lab/SkillFoundry/skills/statistical-and-machine-learning-foundations-for-science/arviz-posterior-diagnostics-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Clustering starter

    ma-compbio-lab/SkillFoundry/skills/statistical-and-machine-learning-foundations-for-science/clustering-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Dowhy average treatment effect starter

    ma-compbio-lab/SkillFoundry/skills/statistical-and-machine-learning-foundations-for-science/dowhy-average-treatment-effect-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Foundation models for biology chemistry science starter

    ma-compbio-lab/SkillFoundry/skills/statistical-and-machine-learning-foundations-for-science/foundation-models-for-biology-chemistry-science-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Multimodal fusion starter

    ma-compbio-lab/SkillFoundry/skills/statistical-and-machine-learning-foundations-for-science/multimodal-fusion-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Optuna bayesian optimization starter

    ma-compbio-lab/SkillFoundry/skills/statistical-and-machine-learning-foundations-for-science/optuna-bayesian-optimization-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Pydoe3 experimental design starter

    ma-compbio-lab/SkillFoundry/skills/statistical-and-machine-learning-foundations-for-science/pydoe3-experimental-design-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Pymc bayesian linear regression starter

    ma-compbio-lab/SkillFoundry/skills/statistical-and-machine-learning-foundations-for-science/pymc-bayesian-linear-regression-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Representation learning starter

    ma-compbio-lab/SkillFoundry/skills/statistical-and-machine-learning-foundations-for-science/representation-learning-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Scipy statistical testing starter

    ma-compbio-lab/SkillFoundry/skills/statistical-and-machine-learning-foundations-for-science/scipy-statistical-testing-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Simulation based inference starter

    ma-compbio-lab/SkillFoundry/skills/statistical-and-machine-learning-foundations-for-science/simulation-based-inference-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Umap dimensionality reduction starter

    ma-compbio-lab/SkillFoundry/skills/statistical-and-machine-learning-foundations-for-science/umap-dimensionality-reduction-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Binding site analysis starter

    ma-compbio-lab/SkillFoundry/skills/structural-biology/binding-site-analysis-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Fold comparison starter

    ma-compbio-lab/SkillFoundry/skills/structural-biology/fold-comparison-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Protein complex metadata starter

    ma-compbio-lab/SkillFoundry/skills/structural-biology/protein-complex-metadata-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Sequence structure alignment starter

    ma-compbio-lab/SkillFoundry/skills/structural-biology/sequence-structure-alignment-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Structure parsing and cleanup starter

    ma-compbio-lab/SkillFoundry/skills/structural-biology/structure-parsing-and-cleanup-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Structure to sequence cross linking starter

    ma-compbio-lab/SkillFoundry/skills/structural-biology/structure-to-sequence-cross-linking-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Visualization starter

    ma-compbio-lab/SkillFoundry/skills/structural-biology/visualization-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Causal network analysis starter

    ma-compbio-lab/SkillFoundry/skills/systems-biology/causal-network-analysis-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Networkx graph construction starter

    ma-compbio-lab/SkillFoundry/skills/systems-biology/networkx-graph-construction-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Networkx network propagation starter

    ma-compbio-lab/SkillFoundry/skills/systems-biology/networkx-network-propagation-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Reactome pathway analysis starter

    ma-compbio-lab/SkillFoundry/skills/systems-biology/reactome-pathway-analysis-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.

  • Reactome pathway hierarchy walk starter

    ma-compbio-lab/SkillFoundry/skills/systems-biology/reactome-pathway-hierarchy-walk-starter Skill

    36★ repo

    A framework for discovering, compiling, and validating reusable skills for scientific agents.