agentsclimarketplace

Arviz posterior diagnostics starter

Skill ma-compbio-lab/SkillFoundry/skills/statistical-and-machine-learning-foundations-for-science/arviz-posterior-diagnostics-starter

A framework for discovering, compiling, and validating reusable skills for scientific agents.

Install
npx -y skills add ma-compbio-lab/SkillFoundry --skill arviz-posterior-diagnostics-starter

Assembled from the repository path, not quoted from the project. Check it against their README if it does not work.

SKILL.md

0.7 KB, as published. Nobody here has run it

ArviZ Posterior Diagnostics Starter

Use this skill to generate a deterministic toy posterior and summarize uncertainty diagnostics with ArviZ.

Run

./slurm/envs/statistics/bin/python \
  skills/statistical-and-machine-learning-foundations-for-science/arviz-posterior-diagnostics-starter/scripts/run_arviz_posterior_diagnostics.py \
  --out scratch/arviz/posterior_diagnostics.json

Output

The JSON summary includes:

  • per-parameter means and 90% HDIs
  • ess_bulk, ess_tail, and r_hat
  • max_rhat and min_ess_bulk

Notes

  • This is a starter for the taxonomy leaf uncertainty-estimation.
  • The posterior is simulated deterministically for reproducible testing; it is not fitted from real data.

Keep looking

Skills are one crate of 328,083. Ordering is by how many stacks a row turns up in, so the top of any crate is what has actually been picked rather than what has the most stars.