Recurrence risk factor extraction
Skill KangjieShen/openscar-starter/skills/research/recurrence-risk-factor-extraction
AI-native scar and keloid phenotyping framework with registry schema, synthetic mock data, validation scripts, and clinician-reviewable workflow skills
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Extract candidate keloid recurrence risk factors from de-identified chart text for clinician-reviewed OpenScar registry entry.
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SKILL.md
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Recurrence Risk Factor Extraction
Description
Use this skill to extract structured candidate recurrence risk factors from de-identified keloid or scar chart text. It prepares research variables for clinician review and registry entry. It does not predict recurrence or assign risk scores.
When to Use
- A retrospective note needs variables for recurrence or treatment-response analysis.
- A case series needs consistent abstraction of lesion, patient, treatment, and follow-up factors.
- A reviewer needs missing-variable questions before data entry.
Do Not Use
- Do not generate patient-specific recurrence predictions.
- Do not treat extracted factors as causal.
- Do not use identifiable records in public outputs.
- Do not infer sensitive demographics unless documented and necessary.
Required Inputs
- De-identified chart text or structured notes.
- Target lesion ID if multiple lesions are present.
- Time window for recurrence assessment.
- Local recurrence definition, if available.
Workflow
- Confirm the note is de-identified.
- Extract patient-level context:
- age at first visit
- sex at birth when documented
- Fitzpatrick skin type when documented
- prior keloid history
- family history
- wound-healing comorbidities
- Extract lesion-level context:
- scar category
- anatomic site
- laterality
- presumed trigger
- duration at baseline
- baseline symptoms
- Extract treatment context:
- modality
- combination treatment
- adverse events
- treatment timing relative to baseline
- Extract outcome context:
- follow-up duration
- response category candidate
- recurrence status candidate
- recurrence definition
- confidence and missing fields
- Produce a candidate variable table and a missing-data checklist.
Output Format
- Extracted candidate risk factors
- Source phrases or evidence snippets, paraphrased when needed
- Suggested OpenScar table and field
- Missing variables
- Ambiguities for clinician review
- Research-use warning
Safety and Compliance
This skill supports documentation, research preparation, and clinician review. It does not diagnose, prescribe, determine recurrence, or replace licensed clinical judgment. Escalate urgent symptoms, suspected infection, wound breakdown, severe pain, rapid progression, bleeding, ulceration, or functional compromise to a qualified clinician.
Use de-identified text and avoid exporting direct identifiers, full dates, addresses, contact details, or identifiable image links.
Examples
Extract recurrence-related variables from this de-identified keloid chart note for OpenScar registry review.
Integration
Works well with keloid-follow-up-intake, scar-treatment-response-review, scar-registry-entry-builder, and scar-literature-review.