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Healthcare informatics

Skill fabioc-aloha/Alex_Skill_Mall/plugins/domain-expertise/healthcare-informatics

Clinical terminology, healthcare compliance (HIPAA/HITECH), patient safety, and health data management.From its SKILL.md

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npx -y skills add fabioc-aloha/Alex_Skill_Mall --skill healthcare-informatics

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SKILL.md

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Healthcare Informatics Skill

Clinical terminology, healthcare compliance (HIPAA/HITECH), patient safety, and health data management.

Core Principle

Healthcare information systems exist to improve patient outcomes. Every data decision balances access (clinicians need information) against privacy (patients deserve protection). When in doubt, protect the patient.

HIPAA Compliance

Protected Health Information (PHI)

PHI is any individually identifiable health information. The 18 HIPAA identifiers:

#IdentifierExample
1NamesFull name
2Geographic dataAddress, ZIP (3-digit OK if population >20K)
3DatesDOB, admission, discharge, death (year OK)
4Phone numbersAll
5Fax numbersAll
6Email addressesAll
7SSNAll
8Medical record numbersAll
9Health plan beneficiary numbersAll
10Account numbersAll
11Certificate/license numbersAll
12Vehicle identifiersVIN, plates
13Device identifiers/serial numbersAll
14Web URLsAll
15IP addressesAll
16Biometric identifiersFingerprints, voice
17Full-face photographsAll
18Any other unique identifying numberAll

De-identification Methods

MethodApproachUse When
Safe HarborRemove all 18 identifiersStandard approach, lower risk
Expert DeterminationStatistical/scientific analysisNeed richer dataset, qualified expert available

Minimum Necessary Standard

  • Use or disclose only the minimum PHI necessary for the purpose
  • Role-based access controls in EHR systems
  • Audit logs for every PHI access

HITECH Act Extensions

RequirementDetail
Breach notification60 days for breaches affecting 500+ individuals
Business Associate liabilityBAs directly liable for HIPAA violations
Audit trailAll access to electronic PHI must be logged
Encryption safe harborEncrypted data breach = not a reportable breach

FHIR Patient Resource Example

{
  "resourceType": "Patient",
  "id": "example",
  "identifier": [
    {
      "system": "http://hospital.org/mrn",
      "value": "12345"
    }
  ],
  "name": [
    {
      "use": "official",
      "family": "Doe",
      "given": ["John"]
    }
  ],
  "gender": "male",
  "birthDate": "1985-06-15",
  "address": [
    {
      "use": "home",
      "city": "Springfield",
      "state": "IL",
      "postalCode": "62704"
    }
  ]
}

Clinical Terminology Standards

Key Coding Systems

SystemPurposeExample
ICD-10Diagnosis codesE11.9 (Type 2 diabetes without complications)
CPTProcedure codes99213 (Office visit, established patient)
SNOMED CTClinical terms73211009 (Diabetes mellitus)
LOINCLab/observation codes2345-7 (Glucose, serum/plasma)
RxNormMedicationsMetformin 500mg oral tablet
NDCDrug packaging10-digit national drug code

Interoperability Standards

StandardRole
HL7 FHIRRESTful API for health data exchange
HL7 v2Legacy messaging (ADT, ORM, ORU)
CDA/C-CDAStructured clinical documents
DICOMMedical imaging format and protocol
X12 EDIInsurance claims (837), eligibility (270/271)

Electronic Health Records (EHR)

Core EHR Functions

  1. Clinical Documentation — Progress notes, assessments, plans
  2. CPOE — Computerized Provider Order Entry (meds, labs, imaging)
  3. CDS — Clinical Decision Support (alerts, reminders, pathways)
  4. Results Management — Lab values, imaging reports
  5. Medication Management — e-Prescribing, interaction checks, reconciliation

Patient Safety Checks

CheckPurpose
Drug-drug interactionsPrevent harmful combinations
Drug-allergy alertsMatch known allergies
Dose range checkingFlag outlier dosages
Duplicate order detectionPrevent redundant tests/meds
Clinical pathway adherenceEvidence-based care protocols

Healthcare Data Analytics

Quality Measures

Measure TypeExampleSource
Process% of diabetics with annual HbA1cHEDIS
Outcome30-day readmission rateCMS
Patient ExperienceHCAHPS survey scoresCMS
StructureEHR adoption rate, nurse-to-patient ratioVarious

Risk Adjustment

  • HCC (Hierarchical Condition Categories) for Medicare risk scoring
  • Comorbidity indices (Charlson, Elixhauser) for severity adjustment
  • Social Determinants of Health (SDOH) as contextual factors

Research & Clinical Trials

IRB Requirements

ElementRequirement
Informed consentWritten, plain language, voluntary
Risk minimizationReasonable procedures, minimal risk where possible
Privacy protectionsDe-identification or limited datasets
Vulnerable populationsExtra safeguards for children, prisoners, pregnant women

Clinical Trial Phases

PhasePurposeSize
Phase ISafety, dosage20–100
Phase IIEfficacy, side effects100–300
Phase IIIConfirm efficacy, monitor adverse1,000–3,000
Phase IVPost-market surveillanceThousands

AI in Healthcare — Guardrails

Critical: AI-generated medical information must never be presented as clinical advice.

  • Always include disclaimer: "This is informational only. Consult a healthcare professional."
  • Never diagnose or recommend treatment
  • Flag when confidence is low or data is ambiguous
  • Cite clinical guidelines (USPSTF, ACC/AHA, IDSA) when referencing evidence-based practices
  • Document provenance of any clinical data used in analysis

Gives 0 of the 12 instructions most healthcare skills give in ~1.4k tokens

Counted across 147 of the 152 authors here whose files we hold, read 2026-08-07

  • Export trial data to CSV formatin 11 of 147, across 2 files
  • Retrieve trial details using an NCT IDin 11 of 147, across 2 files
  • Split clinical datasets strictly by patientin 11 of 147, across 3 files
  • Use the ClinicalTrials.gov API v2in 10 of 147, across 1 file
  • Search trials by condition, drug, location, status or phasein 10 of 147, across 1 file
  • Use maximum page size for bulk data retrievalin 10 of 147, across 1 file
  • Extract and summarize key study informationin 10 of 147, across 1 file
  • Combine multiple filters for targeted searchesin 10 of 147, across 1 file
  • Print and review dataset statistics before modelingin 8 of 147, across 1 file
  • Start model development with simple baselinesin 8 of 147, across 1 file
  • Match preprocessing processors directly to data typesin 8 of 147, across 1 file
  • Monitor validation metrics for task type and class imbalancein 8 of 147, across 1 file

Said here and by no other author read

  • Protect the patient when in doubt
  • Use or disclose only the minimum necessary PHI
  • Implement role-based access controls
  • Include an informational disclaimer for AI health information
  • Document clinical data provenance

Grouped from the skills themselves: near-identical wordings counted once, and counted by distinct author, so one author publishing three of these counts once. Length counted with cl100k_base; the agent that loads this file may tokenize it differently.

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