The catalog
325,949 rows, by stacks then stars
Word embedding based spectrum representation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/word-embedding-based-spectrum-representation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Word2vec embedding training mass spectrometry
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/word2vec-embedding-training-mass-spectrometry Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Word2vec model inference unknown word handling
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/word2vec-model-inference-unknown-word-handling Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/word2vec-model-training Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Word2vec vocabulary matching and unknown peak handling
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/word2vec-vocabulary-matching-and-unknown-peak-handling Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow architecture documentation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-architecture-documentation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow branching logic design
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-branching-logic-design Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-build-system-usage Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow configuration and parameterization
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-configuration-and-parameterization Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow configuration parsing
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-configuration-parsing Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-context-preservation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow definition schema validation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-definition-schema-validation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow orchestration and parallelization
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-orchestration-and-parallelization Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow output validation and qa
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-output-validation-and-qa Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow pipeline execution validation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-pipeline-execution-validation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-reconstruction Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow reproducibility validation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-reproducibility-validation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow routing configuration
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-routing-configuration Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-status-monitoring Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/wpf-gui-compilation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xcms data import preprocessing
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-data-import-preprocessing Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xcms feature extraction and grouping
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-feature-extraction-and-grouping Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xcms grouped object manipulation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-grouped-object-manipulation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xcms grouping result interpretation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-grouping-result-interpretation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xcms object handling and preprocessing
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-object-handling-and-preprocessing Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xcms output replacement workflow
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-output-replacement-workflow Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-parameter-estimation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xcms parameter optimization msw
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-parameter-optimization-msw Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-profile-parsing Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xcms ramclustr data object integration
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-ramclustr-data-object-integration Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xcms ramclustr object integration
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-ramclustr-object-integration Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-workflow-execution Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xenobiotic metabolite annotation from ms ms
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xenobiotic-metabolite-annotation-from-ms-ms Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xic-marker-annotation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xml element parsing and object serialization
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xml-element-parsing-and-object-serialization Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xml parsing and element tree serialization
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xml-parsing-and-element-tree-serialization Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xml schema configuration for bioinformatics tools
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xml-schema-configuration-for-bioinformatics-tools Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xml spectrum element deserialization
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xml-spectrum-element-deserialization Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xml structured metadata construction
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xml-structured-metadata-construction Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Y ion signal detection and noise assessment
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/y-ion-signal-detection-and-noise-assessment Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/yaml-configuration-handling Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/yaml-json-structural-parsing Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Z score normalization for cross dataset comparison
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/z-score-normalization-for-cross-dataset-comparison Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Zero value handling in mass spectrometry data
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/zero-value-handling-in-mass-spectrometry-data Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Adaptive prior distribution selection
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/adaptive-prior-distribution-selection Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Adjacency matrix sparsity analysis
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/adjacency-matrix-sparsity-analysis Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Alternative splicing event comparison across conditions
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/alternative-splicing-event-comparison-across-conditions Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Alternative splicing event parsing
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/alternative-splicing-event-parsing Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Anndata object manipulation and inspection
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/anndata-object-manipulation-and-inspection Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/anndata-object-manipulation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Anndata object structure validation
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/anndata-object-structure-validation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Bayesian effect size moderation
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/bayesian-effect-size-moderation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Bioconductor package operation
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/bioconductor-package-operation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Biological sequence read mapping
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/biological-sequence-read-mapping Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Boundary case read classification via sequence alignment
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/boundary-case-read-classification-via-sequence-alignment Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Buffer management and flush protocols
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/buffer-management-and-flush-protocols Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/c-stream-io-debugging Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Categorical annotation handling in omics data
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/categorical-annotation-handling-in-omics-data Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Chain pruning threshold optimization
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/chain-pruning-threshold-optimization Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Ci pipeline reproducibility verification
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/ci-pipeline-reproducibility-verification Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder