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  • Module import and api verification

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/module-import-and-api-verification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Monocle3 trajectory embedding

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/monocle3-trajectory-embedding Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Motif annotation correlation analysis

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/motif-annotation-correlation-analysis Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Motif database query and matching

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/motif-database-query-and-matching Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Motif enrichment statistical testing

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/motif-enrichment-statistical-testing Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Motif peak overlap matching

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/motif-peak-overlap-matching Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Motif site occupancy comparison

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/motif-site-occupancy-comparison Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Multiome data ingestion paired modalities

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/multiome-data-ingestion-paired-modalities Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Narrow peak calling score threshold

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/narrow-peak-calling-score-threshold Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Narrow peak coordinate validation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/narrow-peak-coordinate-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Nucleotide footprint pattern recognition

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/nucleotide-footprint-pattern-recognition Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Numeric range validation bioinformatics

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/numeric-range-validation-bioinformatics Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Overdispersion correction application

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/overdispersion-correction-application Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Paired insertion counting strategy

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/paired-insertion-counting-strategy Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Peak calling output interpretation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/peak-calling-output-interpretation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Peak calling pseudo bulk aggregation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/peak-calling-pseudo-bulk-aggregation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Pep8 code style compliance verification

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/pep8-code-style-compliance-verification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Poisson statistical enrichment testing

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/poisson-statistical-enrichment-testing Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Poisson test statistical scoring

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/poisson-test-statistical-scoring Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Positional distribution profile aggregation and visualization

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/positional-distribution-profile-aggregation-and-visualization Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Principal component analysis visualization

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/principal-component-analysis-visualization Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Probe detection pvalue filtering

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/probe-detection-pvalue-filtering Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Pytest unit test execution and coverage reporting

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/pytest-unit-test-execution-and-coverage-reporting Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Python dependency version resolution

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/python-dependency-version-resolution Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Python environment management

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/python-environment-management Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Python package api interface design

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/python-package-api-interface-design Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Python pandas data manipulation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/python-pandas-data-manipulation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • R package champ usage

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/r-package-champ-usage Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • R package installation verification

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/r-package-installation-verification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Random matrix theory application

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/random-matrix-theory-application Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Repository cloning and dependency verification

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/repository-cloning-and-dependency-verification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Rna seq expression alignment across cells

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/rna-seq-expression-alignment-across-cells Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Saddle matrix computation from binned tracks

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/saddle-matrix-computation-from-binned-tracks Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Sample similarity assessment from methylation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/sample-similarity-assessment-from-methylation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Scatac seq peak matrix export

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/scatac-seq-peak-matrix-export Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Shell environment variable resolution

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/shell-environment-variable-resolution Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Shell script executability validation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/shell-script-executability-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Simulation based validation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/simulation-based-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Simulation dataset validation benchmarking

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/simulation-dataset-validation-benchmarking Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Single cell atac fragment import processing

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/single-cell-atac-fragment-import-processing Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Single cell atac seq dimensionality reduction

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/single-cell-atac-seq-dimensionality-reduction Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Single cell chromatin data handling

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/single-cell-chromatin-data-handling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Single cell chromatin sample filtering

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/single-cell-chromatin-sample-filtering Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Single cell epigenomics peak analysis

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/single-cell-epigenomics-peak-analysis Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Singular value decomposition interpretation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/singular-value-decomposition-interpretation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Slingshot trajectory embedding

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/slingshot-trajectory-embedding Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Software environment containerization setup

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/software-environment-containerization-setup Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Sparse matrix subset indexing

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/sparse-matrix-subset-indexing Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Sparse matrix validation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/sparse-matrix-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Spectral embedding dimension reduction parameters

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/spectral-embedding-dimension-reduction-parameters Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Spectral embedding scalability benchmarking

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/spectral-embedding-scalability-benchmarking Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Sphinx documentation generation and api reference inclusion

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/sphinx-documentation-generation-and-api-reference-inclusion Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Statistical overlap proportion reporting

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/statistical-overlap-proportion-reporting Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Statistical test comparison

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/statistical-test-comparison Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Stream trajectory data formatting

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/stream-trajectory-data-formatting Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • System dependency version checking

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/system-dependency-version-checking Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • System path configuration and environment setup

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/system-path-configuration-and-environment-setup Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Tabix index validation and inspection

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/tabix-index-validation-and-inspection Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Tf binding site classification

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/tf-binding-site-classification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Tile matrix generation counting strategy selection

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/tile-matrix-generation-counting-strategy-selection Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder