agentsclimarketplace
Sign in

The catalog

325,949 rows, by stacks then stars

  • Bam to bigwig conversion

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bam-to-bigwig-conversion Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bam to fragment file conversion

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bam-to-fragment-file-conversion Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Barcode fragment mapping

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/barcode-fragment-mapping Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bead count threshold filtering

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bead-count-threshold-filtering Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bed format generation from dataframe

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bed-format-generation-from-dataframe Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bedgraph file export

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bedgraph-file-export Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bedgraph file format manipulation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bedgraph-file-format-manipulation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bedgraph format parsing and validation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bedgraph-format-parsing-and-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bedpe format handling

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bedpe-format-handling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Benchmark table parsing and aggregation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/benchmark-table-parsing-and-aggregation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bias corrected z score interpretation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bias-corrected-z-score-interpretation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bigwig signal processing

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bigwig-signal-processing Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bin level sequencing depth calculation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bin-level-sequencing-depth-calculation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Binary path detection and validation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/binary-path-detection-and-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bioinformatics tool binary path resolution

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bioinformatics-tool-binary-path-resolution Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bioinformatics tool version compatibility assessment

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bioinformatics-tool-version-compatibility-assessment Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bisulfite sequencing data loading

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bisulfite-sequencing-data-loading Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bootstrap confidence interval computation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/bootstrap-confidence-interval-computation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Boundary detection thresholding

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/boundary-detection-thresholding Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Checksum verification for reproducibility

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/checksum-verification-for-reproducibility Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Chip seq peak calling workflow

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/chip-seq-peak-calling-workflow Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Chip seq read alignment filtering

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/chip-seq-read-alignment-filtering Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Chip seq signal pileup extension

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/chip-seq-signal-pileup-extension Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Chromatin accessibility bias correction

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/chromatin-accessibility-bias-correction Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Chromatin accessibility binding status classification

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/chromatin-accessibility-binding-status-classification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Chromatin accessibility deviation computation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/chromatin-accessibility-deviation-computation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Chromatin accessibility footprint visualization

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/chromatin-accessibility-footprint-visualization Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Chromatin accessibility occupancy prediction

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/chromatin-accessibility-occupancy-prediction Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Chromatin accessibility quantification

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/chromatin-accessibility-quantification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Chromatin accessibility variability ranking

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/chromatin-accessibility-variability-ranking Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Chromatin domain boundary detection

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/chromatin-domain-boundary-detection Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cis contact frequency analysis

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/cis-contact-frequency-analysis Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cluster umap layout reproducibility benchmarking

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/cluster-umap-layout-reproducibility-benchmarking Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Clustering accuracy metric extraction

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/clustering-accuracy-metric-extraction Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Compartment strength quantification

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/compartment-strength-quantification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Compressed sparse row matrix handling

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/compressed-sparse-row-matrix-handling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Computational complexity validation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/computational-complexity-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Conda environment creation and management

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/conda-environment-creation-and-management Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Configuration file generation and templating

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/configuration-file-generation-and-templating Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Contact distance binning logarithmic

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/contact-distance-binning-logarithmic Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Contact frequency aggregation by genomic feature

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/contact-frequency-aggregation-by-genomic-feature Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Contact frequency smoothing log space

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/contact-frequency-smoothing-log-space Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cooler file format handling

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/cooler-file-format-handling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cooler file loading and querying

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/cooler-file-loading-and-querying Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cosine similarity metric application

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/cosine-similarity-metric-application Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cpg base filtering by statistical threshold

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/cpg-base-filtering-by-statistical-threshold Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cpg island feature classification

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/cpg-island-feature-classification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cross modality embedding integration

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/cross-modality-embedding-integration Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Dependency installation and verification

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/dependency-installation-and-verification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Dependency resolution and validation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/dependency-resolution-and-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Deviation score computation and interpretation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/deviation-score-computation-and-interpretation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Differential accessibility interpretation

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/differential-accessibility-interpretation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Differential chromatin accessibility analysis between cell types

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/differential-chromatin-accessibility-analysis-between-cell-types Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Differential tf occupancy analysis

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/differential-tf-occupancy-analysis Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Dmr detection bumphunter

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/dmr-detection-bumphunter Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Dna methylation array data import

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/dna-methylation-array-data-import Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Dna methylation block detection analysis

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/dna-methylation-block-detection-analysis Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Dna methylation differential analysis

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/dna-methylation-differential-analysis Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Dna methylation file format handling

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/dna-methylation-file-format-handling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Dna methylation quality control

    HolobiomicsLab/asb-skill-collections/collections/epigenomics/v1/skills/dna-methylation-quality-control Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder