1,967 of these skill files have been read, by 1,553 distinct authors, and what they tell an agent counted. What Setup & scaffolding authors agree on, and what they forbid

• 2941

  Metabolomics peak detection configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ce-ms/skills/metabolomics-peak-detection-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2942

  Msconvert tool configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ce-ms/skills/msconvert-tool-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2943

  Peak picking parameter configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ce-ms/skills/peak-picking-parameter-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2944

  Mz retention time tolerance parameter configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/direct-infusion/skills/mz-retention-time-tolerance-parameter-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2945

  Modulation parameter configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/gc-ms/skills/modulation-parameter-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2946

  Mz retention time tolerance parameter configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/gc-ms/skills/mz-retention-time-tolerance-parameter-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2947

  Plate layout parameter configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/gc-ms/skills/plate-layout-parameter-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2948

  Workflow routing configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/gc-ms/skills/workflow-routing-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2949

  Command line interface configuration and automation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/command-line-interface-configuration-and-automation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2950

  Command line tool invocation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/command-line-tool-invocation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2951

  Msi preprocessing parameter configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/msi-preprocessing-parameter-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2952

  Saturation threshold configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/saturation-threshold-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2953

  Toml configuration file preparation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/toml-configuration-file-preparation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2954

  Workflow routing configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/workflow-routing-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2955

  Command line interface configuration and automation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/command-line-interface-configuration-and-automation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2956

  Computational environment configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/computational-environment-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2957

  Configuration driven batch processing

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/configuration-driven-batch-processing · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2958

  Configuration file modification

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/configuration-file-modification · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2959

  Configuration file validation dynaconf

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/configuration-file-validation-dynaconf · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2960

  Formula sampler configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/formula-sampler-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2961

  Gpu acceleration cuda configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/gpu-acceleration-cuda-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2962

  Hyperparameter sweep configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/hyperparameter-sweep-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2963

  Inference model cpu thread configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/inference-model-cpu-thread-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2964

  Jpa module execution and configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/jpa-module-execution-and-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2965

  Mass spectrometer simulator configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/mass-spectrometer-simulator-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2966

  Memo ms api usage and parameter configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/memo-ms-api-usage-and-parameter-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2967

  Metabolomics peak detection configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/metabolomics-peak-detection-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2968

  Modular fragmentor interface configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/modular-fragmentor-interface-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2969

  Molecular networking parameter configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/molecular-networking-parameter-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2970

  Msconvert parameter configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/msconvert-parameter-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2971

  Msexperiment backend configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/msexperiment-backend-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2972

  Mz retention time tolerance parameter configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/mz-retention-time-tolerance-parameter-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2973

  Mzmine batch processing configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/mzmine-batch-processing-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2974

  Neural network regularization configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/neural-network-regularization-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2975

  Nextflow pipeline configuration hpc

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/nextflow-pipeline-configuration-hpc · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2976

  Notification configuration management

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/notification-configuration-management · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2977

  Peak picking parameter configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/peak-picking-parameter-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2978

  Signal apodization configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/signal-apodization-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2979

  Singularity container backend setup

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/singularity-container-backend-setup · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2980

  System environment configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/system-environment-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2981

  Targeted peak integration configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/targeted-peak-integration-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2982

  Vimms controller configuration and execution

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/vimms-controller-configuration-and-execution · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2983

  Virtual mass spectrometer configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/virtual-mass-spectrometer-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2984

  Workflow configuration and parameterization

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-configuration-and-parameterization · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2985

  Workflow routing configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-routing-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2986

  Yaml configuration handling

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/yaml-configuration-handling · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2987

  Configuration file generation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/configuration-file-generation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2988

  Configuration file interpretation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/configuration-file-interpretation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2989

  Configuration object pattern

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/configuration-object-pattern · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2990

  Configuration schema validation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/configuration-schema-validation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2991

  Container port mapping configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/container-port-mapping-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2992

  Csv delimiter parsing and configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/csv-delimiter-parsing-and-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2993

  Docker volume mount configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/docker-volume-mount-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2994

  Galaxy installation configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/galaxy-installation-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2995

  Histogram bin width configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/histogram-bin-width-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2996

  Msconvert workflow configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/msconvert-workflow-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2997

  Parameter configuration conditional logic

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/parameter-configuration-conditional-logic · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2998

  Quantitative mode metabolomics configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/quantitative-mode-metabolomics-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 2999

  R parallel backend configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/r-parallel-backend-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 3000

  Repository environment setup

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/repository-environment-setup · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder