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Interpro entry summary

Skill ma-compbio-lab/SkillFoundry/skills/proteomics/interpro-entry-summary

A framework for discovering, compiling, and validating reusable skills for scientific agents.From the repository description

Install
npx -y skills add ma-compbio-lab/SkillFoundry --skill interpro-entry-summary

Assembled from the repository path, not quoted from the project. Check it against their README if it does not work.

SKILL.md

1.0 KB, 229 tokens by cl100k_base, as published. Nobody here has run it

InterPro Entry Summary

Use this skill to fetch a protein family or domain entry from the official InterPro API and summarize its key metadata.

What it does

  • Calls the official InterPro API for a specific InterPro accession.
  • Returns the accession, name, type, GO-term count, and member-database coverage.
  • Produces compact JSON suitable for downstream protein-annotation or domain-family workflows.

When to use it

  • You need a lightweight protein family/domain lookup skill.
  • You want an official InterPro-backed summary starter for proteomics or protein biology tasks.

Example

python3 skills/proteomics/interpro-entry-summary/scripts/fetch_interpro_entry.py \
  --accession IPR000023 \
  --out scratch/interpro/ipr000023_summary.json

Verification

  • Skill-local tests: python3 -m unittest discover -s skills/proteomics/interpro-entry-summary/tests -p 'test_*.py'
  • Repository smoke: python3 -m unittest tests.smoke.test_phase25_agent_and_clinical_skills -v

What ships with it: 6 files

5.5 KB alongside SKILL.md, 2 of them executable

assets/

examples/

scripts/

tests/

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