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Clinicaltrials study search

Skill ma-compbio-lab/SkillFoundry/skills/clinical-biomedical-data-science/clinicaltrials-study-search

Use this skill to search the current ClinicalTrials.gov v2 API for condition or keyword matches when you need official clinical-study metadata. Do not use it for legacy API URLs or offline work.From its SKILL.md

Install
npx -y skills add ma-compbio-lab/SkillFoundry --skill clinicaltrials-study-search

Assembled from the repository path, not quoted from the project. Check it against their README if it does not work.

One thing to look at

  • runs commandsInstructs the agent to run 1 command, including `python3 skills/clinical-biomedical-data-science/clinicaltrials-study-search/scripts/search_clinicaltrials.py --condition melanoma --page-size 3 --out skills/clinical-biomedical-data-science/clinicaltr`.

SKILL.md

1.8 KB, 378 tokens by cl100k_base, as published. Nobody here has run it

Purpose

Query the current ClinicalTrials.gov v2 API and save structured study metadata for a condition or free-text term.

When to use

  • You need official clinical study metadata.
  • You want a lightweight search path for cohort or intervention discovery.

When not to use

  • You need patient-level data.
  • You are working against deprecated ClinicalTrials.gov API examples.

Inputs

  • A condition query or a general term query
  • Optional page size and output path

Outputs

  • JSON payload containing studies

Requirements

  • Python 3.13+
  • Network access to clinicaltrials.gov

Procedure

  1. Run python3 skills/clinical-biomedical-data-science/clinicaltrials-study-search/scripts/search_clinicaltrials.py --condition melanoma --page-size 3 --out skills/clinical-biomedical-data-science/clinicaltrials-study-search/assets/melanoma_studies.json.
  2. Inspect the first protocolSection.identificationModule block.
  3. Use the result list for follow-up triage or cohort narrowing.

Validation

  • Command exits successfully.
  • Output contains studies.
  • A common query returns at least one study.

Failure modes and fixes

  • 404 or legacy errors: use api/v2 endpoints only.
  • No results: switch between --condition and --term.

Safety and limits

  • Public study metadata only.
  • This skill does not provide patient-level or operational medical guidance.

Examples

  • python3 .../search_clinicaltrials.py --term melanoma --page-size 2

Provenance

Related skills

  • ncbi-pubmed-search

What ships with it: 8 files

188.7 KB alongside SKILL.md, 1 of them executable

examples/

scripts/

tests/

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