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The catalog

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  • Simulation parameter variation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/simulation-parameter-variation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Simulation result reproduction

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/simulation-result-reproduction Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Simulation result validation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/simulation-result-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Single cell spatial metabolomics data processing

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/single-cell-spatial-metabolomics-data-processing Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Singly charged ion mass calculation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/singly-charged-ion-mass-calculation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Singular value decomposition application

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/singular-value-decomposition-application Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Singular value decomposition metabolomics

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/singular-value-decomposition-metabolomics Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Singular value decomposition pathway analysis

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/singular-value-decomposition-pathway-analysis Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Singularity container backend setup

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/singularity-container-backend-setup Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Singularity container deployment

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/singularity-container-deployment Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Singularity container image building and execution

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/singularity-container-image-building-and-execution Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Sinusoidal embedding implementation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/sinusoidal-embedding-implementation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Sinusoidal positional encoding design

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/sinusoidal-positional-encoding-design Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Sirius spectral request construction

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/sirius-spectral-request-construction Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Sirius zodiac score filtering

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/sirius-zodiac-score-filtering Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Skyline import format specification

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/skyline-import-format-specification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Slack api integration

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/slack-api-integration Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Slurm gpu resource allocation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/slurm-gpu-resource-allocation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Small molecule 3d structure preparation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/small-molecule-3d-structure-preparation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Small molecule chromatography modeling

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/small-molecule-chromatography-modeling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Small molecule compound indexing

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/small-molecule-compound-indexing Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Small molecule structure input preparation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/small-molecule-structure-input-preparation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Small molecule structure matching

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/small-molecule-structure-matching Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smarts pattern design for microbial degradation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smarts-pattern-design-for-microbial-degradation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smarts pattern matching for chemical transformation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smarts-pattern-matching-for-chemical-transformation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smarts reaction rule encoding

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smarts-reaction-rule-encoding Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles adduct form enumeration

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-adduct-form-enumeration Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles canonicalization rdkit

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-canonicalization-rdkit Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles format handling

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-format-handling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles format preparation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-format-preparation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles formula representation chemistry

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-formula-representation-chemistry Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles identifier assignment from structure files

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-identifier-assignment-from-structure-files Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles inchi fasta format recognition

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-inchi-fasta-format-recognition Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles inchi round trip validation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-inchi-round-trip-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles mol file parsing

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-mol-file-parsing Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles molecular parsing

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-molecular-parsing Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles notation parsing

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-notation-parsing Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles parsing and validation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-parsing-and-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles parsing validation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-parsing-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles sdf format handling

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-sdf-format-handling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles sdf molecule format handling

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-sdf-molecule-format-handling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles sdf parsing validation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-sdf-parsing-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles sdf parsing

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-sdf-parsing Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles string formatting

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-string-formatting Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles string parsing and validation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-string-parsing-and-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles string parsing

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-string-parsing Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles string preparation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-string-preparation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles string translation and standardization

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-string-translation-and-standardization Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles string validation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-string-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles structure annotation from molfiles

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-structure-annotation-from-molfiles Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles structure annotation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-structure-annotation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles structure format validation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-structure-format-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles structure preparation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-structure-preparation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles structure representation handling

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-structure-representation-handling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smiles tokenization and canonical representation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smiles-tokenization-and-canonical-representation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Smoothing spline basis selection

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/smoothing-spline-basis-selection Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Snakemake dag generation and execution

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/snakemake-dag-generation-and-execution Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Snr based signal validation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/snr-based-signal-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Sodium adduct detection and classification

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/sodium-adduct-detection-and-classification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Soft thresholding adjacency weighting

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/soft-thresholding-adjacency-weighting Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder