969 of these skill files have been read, by 779 distinct authors, and what they tell an agent counted. What Ship & operate authors agree on, and what they forbid

• 13561

  Docker multistage build execution

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/docker-multistage-build-execution · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13562

  Docker network creation

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/docker-network-creation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13563

  Docker volume mount configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/docker-volume-mount-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13564

  Dockerfile dependency management

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/dockerfile-dependency-management · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13565

  Dockerfile multi stage build architecture

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/dockerfile-multi-stage-build-architecture · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13566

  Feature branch workflow management

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/feature-branch-workflow-management · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13567

  File i o automation

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/file-i-o-automation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13568

  Ftms mass calibration workflow

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/ftms-mass-calibration-workflow · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13569

  Git branch workflow validation

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/git-branch-workflow-validation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13570

  Git repository cloning and version control

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/git-repository-cloning-and-version-control · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13571

  Github actions api integration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/github-actions-api-integration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13572

  Github actions artifact retrieval

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/github-actions-artifact-retrieval · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13573

  Github actions workflow configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/github-actions-workflow-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13574

  Github actions workflow execution

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/github-actions-workflow-execution · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13575

  Github actions workflow inspection and execution

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/github-actions-workflow-inspection-and-execution · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13576

  Github release metadata comparison

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/github-release-metadata-comparison · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13577

  Gnps workflow identification

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/gnps-workflow-identification · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13578

  Gnps workflow identifier retrieval

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/gnps-workflow-identifier-retrieval · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13579

  Gnps workflow result processing

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/gnps-workflow-result-processing · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13580

  Hash based deduplication workflow

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/hash-based-deduplication-workflow · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13581

  Interactive workflow validation

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/interactive-workflow-validation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13582

  Ion image quantification workflow

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/ion-image-quantification-workflow · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13583

  Ion target quality monitoring

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/ion-target-quality-monitoring · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13584

  Java build artifact validation

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/java-build-artifact-validation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13585

  Jupyter notebook workflow automation

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/jupyter-notebook-workflow-automation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13586

  Jupyter notebook workflow execution

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/jupyter-notebook-workflow-execution · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13587

  Jvm dependency resolution

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/jvm-dependency-resolution · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13588

  Knime workflow orchestration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/knime-workflow-orchestration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13589

  Lcms workflow orchestration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/lcms-workflow-orchestration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13590

  Lda convergence monitoring and iteration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/lda-convergence-monitoring-and-iteration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13591

  Library integration workflow

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/library-integration-workflow · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13592

  Mass spectrometry workflow orchestration snakemake

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/mass-spectrometry-workflow-orchestration-snakemake · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13593

  Mass spectrometry workflow orchestration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/mass-spectrometry-workflow-orchestration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13594

  Metabolite identity ground truth validation

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/metabolite-identity-ground-truth-validation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13595

  Metabolomic meta analysis workflow design

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/metabolomic-meta-analysis-workflow-design · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13596

  Metabolomic workflow ranking visualization

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/metabolomic-workflow-ranking-visualization · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13597

  Metabolomics functional prediction workflow validation

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/metabolomics-functional-prediction-workflow-validation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13598

  Metabolomics tool deployment

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/metabolomics-tool-deployment · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13599

  Metabolomics workflow step enumeration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/metabolomics-workflow-step-enumeration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13600

  Model deployment preparation

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/model-deployment-preparation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13601

  Model weight loading and deployment

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/model-weight-loading-and-deployment · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13602

  Msconvert workflow configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/msconvert-workflow-configuration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13603

  Multi stage dockerfile interpretation

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/multi-stage-dockerfile-interpretation · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13604

  Natural products workflow orchestration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/natural-products-workflow-orchestration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13605

  Neural network model deployment in python

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/neural-network-model-deployment-in-python · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13606

  Neural network model deployment

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/neural-network-model-deployment · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13607

  Neural network model inference deployment

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/neural-network-model-inference-deployment · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13608

  Nextflow workflow execution

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/nextflow-workflow-execution · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13609

  Nextflow workflow orchestration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/nextflow-workflow-orchestration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13610

  Nmr workflow pipeline execution

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/nmr-workflow-pipeline-execution · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13611

  Nontargeted analysis workflow execution

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/nontargeted-analysis-workflow-execution · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13612

  Over representation analysis workflow

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/over-representation-analysis-workflow · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13613

  Parallel computing workflow orchestration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/parallel-computing-workflow-orchestration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13614

  Preprocessing workflow comparative ranking

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/preprocessing-workflow-comparative-ranking · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13615

  Python workflow execution and orchestration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/python-workflow-execution-and-orchestration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13616

  Python workflow scripting

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/python-workflow-scripting · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13617

  Qc workflow component inspection

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/qc-workflow-component-inspection · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13618

  R bioconductor omics workflow

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/r-bioconductor-omics-workflow · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13619

  R bioconductor workflow orchestration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/r-bioconductor-workflow-orchestration · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 13620

  R function workflow execution

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/r-function-workflow-execution · Skill

  15★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder