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Plan & spec

10,946 rows, by stacks then stars

2,010 of these skill files have been read, by 1,360 distinct authors, and what they tell an agent counted. What Plan & spec authors agree on, and what they forbid

  • Tool parameter specification and validation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/tool-parameter-specification-and-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Uncertainty estimation across models

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/uncertainty-estimation-across-models Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Variance estimation within and between groups

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/variance-estimation-within-and-between-groups Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Vendor file format specification handling

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/vendor-file-format-specification-handling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Xcms parameter estimation

    HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-parameter-estimation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Dispersion estimation negative binomial

    HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/dispersion-estimation-negative-binomial Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Empirical bayes variance estimation

    HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/empirical-bayes-variance-estimation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Factor design specification

    HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/factor-design-specification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Log fold change shrinkage estimation

    HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/log-fold-change-shrinkage-estimation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Monte carlo p value estimation adaptive

    HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/monte-carlo-p-value-estimation-adaptive Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Overdispersion estimation validation

    HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/overdispersion-estimation-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Rna seq experimental design specification

    HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/rna-seq-experimental-design-specification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Electrophoretic system parameter specification

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ce-ms/skills/electrophoretic-system-parameter-specification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Peaklist metabolite assignment prioritization

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ce-ms/skills/peaklist-metabolite-assignment-prioritization Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Vendor file format specification handling

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ce-ms/skills/vendor-file-format-specification-handling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Blank sample background interference estimation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/direct-infusion/skills/blank-sample-background-interference-estimation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Technical specification tabulation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/direct-infusion/skills/technical-specification-tabulation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Concentration matrix estimation gc ms

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/gc-ms/skills/concentration-matrix-estimation-gc-ms Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Injection order direction specification

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/gc-ms/skills/injection-order-direction-specification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Missing data mechanism specification

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/gc-ms/skills/missing-data-mechanism-specification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Scalability extrapolation and throughput estimation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/gc-ms/skills/scalability-extrapolation-and-throughput-estimation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Baseline and noise level estimation from quartile statistics

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/baseline-and-noise-level-estimation-from-quartile-statistics Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Collision cross section bias estimation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/collision-cross-section-bias-estimation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Pandas dataframe column specification

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/pandas-dataframe-column-specification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Baseline and noise level estimation from quartile statistics

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/baseline-and-noise-level-estimation-from-quartile-statistics Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Baseline noise estimation chromatogram

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/baseline-noise-estimation-chromatogram Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Blank sample background interference estimation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/blank-sample-background-interference-estimation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Box cox transformation parameter estimation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/box-cox-transformation-parameter-estimation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cascade search strategy for peptide identification

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/cascade-search-strategy-for-peptide-identification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cluster based candidate prioritization

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/cluster-based-candidate-prioritization Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Component candidate prioritization filtering

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/component-candidate-prioritization-filtering Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Connected component decomposition in mass spectrometry

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/connected-component-decomposition-in-mass-spectrometry Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Csv format specification compliance

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/csv-format-specification-compliance Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Dda fragmentation strategy parameterization

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/dda-fragmentation-strategy-parameterization Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Dda fragmentation strategy simulation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/dda-fragmentation-strategy-simulation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Dependency requirement validation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/dependency-requirement-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Dynamic exclusion weighting strategy evaluation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/dynamic-exclusion-weighting-strategy-evaluation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Fragmentation strategy comparison across datasets

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/fragmentation-strategy-comparison-across-datasets Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Full scan acquisition strategy

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/full-scan-acquisition-strategy Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Installation requirement validation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/installation-requirement-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Interactive plot construction mass spec

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/interactive-plot-construction-mass-spec Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Lipid library format specification

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/lipid-library-format-specification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Lipid structure specification

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/lipid-structure-specification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Mass spec tolerance parameter application

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/mass-spec-tolerance-parameter-application Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Metabolic model constraint specification

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/metabolic-model-constraint-specification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Metabolite set decomposition plage

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/metabolite-set-decomposition-plage Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Missing data mechanism specification

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/missing-data-mechanism-specification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Missing value imputation strategy selection

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/missing-value-imputation-strategy-selection Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Ms dial export file specification

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/ms-dial-export-file-specification Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Ms dial peak character estimation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/ms-dial-peak-character-estimation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Multiplexed spectrum decomposition

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/multiplexed-spectrum-decomposition Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Network diffusion prioritization

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/network-diffusion-prioritization Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Open modification spectral search strategy

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/open-modification-spectral-search-strategy Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Pairwise alignment with anchor prioritization

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/pairwise-alignment-with-anchor-prioritization Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Pathway activity decomposition via plage

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/pathway-activity-decomposition-via-plage Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Pathway activity decomposition via svd

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/pathway-activity-decomposition-via-svd Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Pathway ranking and prioritization

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/pathway-ranking-and-prioritization Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Permutation test p value estimation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/permutation-test-p-value-estimation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Pfas candidate prioritization by scoring

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/pfas-candidate-prioritization-by-scoring Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Pfas feature prioritization

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/pfas-feature-prioritization Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder