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Engineering

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  • Transformer encoder architecture training

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/transformer-encoder-architecture-training Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Tree structure optimization for metabolite deconvolution

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/tree-structure-optimization-for-metabolite-deconvolution Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Tsne embedding dimensionality reduction

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/tsne-embedding-dimensionality-reduction Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Unit test coverage for conditional workflows

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/unit-test-coverage-for-conditional-workflows Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Unit test design for model parameters

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/unit-test-design-for-model-parameters Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Unit test design for scoring metrics

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/unit-test-design-for-scoring-metrics Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Untargeted metabolomics workflow implementation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/untargeted-metabolomics-workflow-implementation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Vimms controller configuration and execution

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/vimms-controller-configuration-and-execution Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Virtual mass spectrometer configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/virtual-mass-spectrometer-configuration Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Web application endpoint mapping

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/web-application-endpoint-mapping Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Web service api integration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/web-service-api-integration Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Word embedding aggregation for spectral data

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/word-embedding-aggregation-for-spectral-data Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Word2vec embedding training mass spectrometry

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/word2vec-embedding-training-mass-spectrometry Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Workflow architecture documentation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-architecture-documentation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Workflow branching logic design

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-branching-logic-design Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Workflow configuration and parameterization

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-configuration-and-parameterization Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Workflow output validation and qa

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-output-validation-and-qa Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Workflow pipeline execution validation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-pipeline-execution-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Workflow reconstruction

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-reconstruction Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Workflow reproducibility validation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-reproducibility-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Workflow routing configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-routing-configuration Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Xcms output replacement workflow

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/xcms-output-replacement-workflow Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Xcms parameter optimization msw

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/xcms-parameter-optimization-msw Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Xcms workflow execution

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/xcms-workflow-execution Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Yaml configuration handling

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/yaml-configuration-handling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Annotation coverage statistics computation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/annotation-coverage-statistics-computation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Api endpoint communication

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/api-endpoint-communication Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Backend compatibility verification visualization library

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/backend-compatibility-verification-visualization-library Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Backend performance benchmarking

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/backend-performance-benchmarking Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Backend performance comparison

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/backend-performance-comparison Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Backend routing and dispatch

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/backend-routing-and-dispatch Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Batch script execution and automation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/batch-script-execution-and-automation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Benchmark dataset generation from reference metabolites

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/benchmark-dataset-generation-from-reference-metabolites Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Benchmark table generation and reporting

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/benchmark-table-generation-and-reporting Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Ci cd workflow monitoring

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/ci-cd-workflow-monitoring Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Classification performance evaluation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/classification-performance-evaluation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Classification workflow parameter toggling

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/classification-workflow-parameter-toggling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Classyfire batch database querying

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/classyfire-batch-database-querying Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cnn architecture design for spectral data

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/cnn-architecture-design-for-spectral-data Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Code repository analysis

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/code-repository-analysis Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Command line interface testing

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/command-line-interface-testing Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Comparative performance profiling

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/comparative-performance-profiling Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Computational performance benchmarking and timing measurement

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/computational-performance-benchmarking-and-timing-measurement Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Computational throughput measurement

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/computational-throughput-measurement Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Conditional dispatch workflow implementation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/conditional-dispatch-workflow-implementation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Configuration file generation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/configuration-file-generation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Configuration file interpretation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/configuration-file-interpretation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Configuration object pattern

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/configuration-object-pattern Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Configuration schema validation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/configuration-schema-validation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Container port mapping configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/container-port-mapping-configuration Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cpu gpu performance benchmarking

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/cpu-gpu-performance-benchmarking Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cross platform software capability mapping

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/cross-platform-software-capability-mapping Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Csv delimiter parsing and configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/csv-delimiter-parsing-and-configuration Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Data handoff pipeline orchestration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/data-handoff-pipeline-orchestration Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Data ingestion pipeline design

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/data-ingestion-pipeline-design Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Database record conditional update

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/database-record-conditional-update Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Database schema design and implementation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/database-schema-design-and-implementation Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Dataframe construction from backend sources

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/dataframe-construction-from-backend-sources Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Decoy database generation for metabolomics

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/decoy-database-generation-for-metabolomics Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Deletion reason logging and traceability

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/deletion-reason-logging-and-traceability Skill

    15★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder