Engineering
99,663 rows, by stacks then stars
Unit test validation for preprocessing
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/unit-test-validation-for-preprocessing Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/unit-test-validation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Unit testing conditional branches
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/unit-testing-conditional-branches Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Univariate statistical testing for metabolomics
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/univariate-statistical-testing-for-metabolomics Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Untargeted metabolomics workflow implementation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/untargeted-metabolomics-workflow-implementation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Validation test design for biochemical identifiers
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/validation-test-design-for-biochemical-identifiers Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Version specific deployment configuration
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/version-specific-deployment-configuration Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Vimms controller configuration and execution
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/vimms-controller-configuration-and-execution Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Virtual environment configuration
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/virtual-environment-configuration Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Virtual mass spectrometer configuration
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/virtual-mass-spectrometer-configuration Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Visualization comparative performance metrics
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/visualization-comparative-performance-metrics Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Vocabulary coverage validation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/vocabulary-coverage-validation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Web application endpoint mapping
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/web-application-endpoint-mapping Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/web-service-api-integration Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Web service deployment validation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/web-service-deployment-validation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/web-service-health-monitoring Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Webassembly local loading setup
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/webassembly-local-loading-setup Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Weighted loss function optimization
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/weighted-loss-function-optimization Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Windows desktop application deployment
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/windows-desktop-application-deployment Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Wine windows runtime configuration
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/wine-windows-runtime-configuration Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Word embedding aggregation for spectral data
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/word-embedding-aggregation-for-spectral-data Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Word embedding based spectrum representation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/word-embedding-based-spectrum-representation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Word2vec embedding training mass spectrometry
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/word2vec-embedding-training-mass-spectrometry Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow architecture documentation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-architecture-documentation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow branching logic design
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-branching-logic-design Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-build-system-usage Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow configuration and parameterization
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-configuration-and-parameterization Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow configuration parsing
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-configuration-parsing Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-context-preservation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow definition schema validation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-definition-schema-validation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow orchestration and parallelization
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-orchestration-and-parallelization Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow output validation and qa
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-output-validation-and-qa Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow pipeline execution validation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-pipeline-execution-validation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-reconstruction Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow reproducibility validation
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-reproducibility-validation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Workflow routing configuration
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-routing-configuration Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-status-monitoring Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xcms output replacement workflow
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-output-replacement-workflow Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xcms parameter optimization msw
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-parameter-optimization-msw Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-workflow-execution Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xml element parsing and object serialization
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xml-element-parsing-and-object-serialization Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Xml schema configuration for bioinformatics tools
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xml-schema-configuration-for-bioinformatics-tools Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/yaml-configuration-handling Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/c-stream-io-debugging Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Chain pruning threshold optimization
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/chain-pruning-threshold-optimization Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Ci pipeline reproducibility verification
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/ci-pipeline-reproducibility-verification Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Differential splicing statistical testing
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/differential-splicing-statistical-testing Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Gene expression statistical testing
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/gene-expression-statistical-testing Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Git repository cloning and fork management
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/git-repository-cloning-and-fork-management Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Hatch environment configuration and activation
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/hatch-environment-configuration-and-activation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Independent filtering multiple testing correction
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/independent-filtering-multiple-testing-correction Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Independent filtering optimization
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/independent-filtering-optimization Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Lazy computation orchestration with dask
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/lazy-computation-orchestration-with-dask Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Memory efficient single cell computation
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/memory-efficient-single-cell-computation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Multiple testing correction visualization
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/multiple-testing-correction-visualization Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Pytest test suite execution and result interpretation
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/pytest-test-suite-execution-and-result-interpretation Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Seurat workflow orchestration for scrnaseq
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/seurat-workflow-orchestration-for-scrnaseq Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Statistical hypothesis testing rna seq
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/statistical-hypothesis-testing-rna-seq Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Statistical ranking wilcoxon test
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/statistical-ranking-wilcoxon-test Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder
Test failure diagnosis and logging analysis
HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/test-failure-diagnosis-and-logging-analysis Skill
15★ repoCurated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder