998 of these skill files have been read, by 745 distinct authors, and what they tell an agent counted. What Workflow automation authors agree on, and what they forbid

• 6061

  Workflow output validation and qa

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-output-validation-and-qa · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6062

  Workflow pipeline execution validation

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-pipeline-execution-validation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6063

  Workflow reconstruction

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-reconstruction · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6064

  Workflow reproducibility validation

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-reproducibility-validation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6065

  Workflow routing configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-routing-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6066

  Workflow status monitoring

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/workflow-status-monitoring · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6067

  Xcms output replacement workflow

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-output-replacement-workflow · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6068

  Xcms workflow execution

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/xcms-workflow-execution · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6069

  Seurat workflow orchestration for scrnaseq

  HolobiomicsLab/asb-skill-collections/collections/transcriptomics/v1/skills/seurat-workflow-orchestration-for-scrnaseq · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6070

  R workflow scripting for analytical chemistry

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ce-ms/skills/r-workflow-scripting-for-analytical-chemistry · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6071

  Ion image quantification workflow

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/direct-infusion/skills/ion-image-quantification-workflow · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6072

  Knime workflow orchestration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/direct-infusion/skills/knime-workflow-orchestration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6073

  Metabolomics workflow step enumeration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/gc-ms/skills/metabolomics-workflow-step-enumeration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6074

  Parallel computing workflow orchestration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/gc-ms/skills/parallel-computing-workflow-orchestration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6075

  Separation technique workflow alignment

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/gc-ms/skills/separation-technique-workflow-alignment · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6076

  Workflow routing configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/gc-ms/skills/workflow-routing-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6077

  Xcms workflow execution

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/gc-ms/skills/xcms-workflow-execution · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6078

  Command line interface configuration and automation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/command-line-interface-configuration-and-automation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6079

  Jupyter notebook workflow execution

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/jupyter-notebook-workflow-execution · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6080

  Mass spectrometry workflow orchestration snakemake

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/mass-spectrometry-workflow-orchestration-snakemake · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6081

  Mass spectrometry workflow orchestration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/mass-spectrometry-workflow-orchestration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6082

  Separation technique workflow alignment

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/separation-technique-workflow-alignment · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6083

  Workflow orchestration and parallelization

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/workflow-orchestration-and-parallelization · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6084

  Workflow reconstruction

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/workflow-reconstruction · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6085

  Workflow routing configuration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/workflow-routing-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6086

  Xcms workflow execution

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/xcms-workflow-execution · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6087

  Batch effect correction workflow

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/batch-effect-correction-workflow · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6088

  Cli invocation with file path arguments

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/cli-invocation-with-file-path-arguments · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6089

  Command line interface configuration and automation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/command-line-interface-configuration-and-automation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6090

  Cross validation workflow execution

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/cross-validation-workflow-execution · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6091

  Cross workflow format translation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/cross-workflow-format-translation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6092

  File i o automation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/file-i-o-automation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6093

  Gnps workflow identification

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/gnps-workflow-identification · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6094

  Gnps workflow identifier retrieval

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/gnps-workflow-identifier-retrieval · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6095

  Gnps workflow result processing

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/gnps-workflow-result-processing · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6096

  Interactive workflow validation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/interactive-workflow-validation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6097

  Ion image quantification workflow

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/ion-image-quantification-workflow · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6098

  Jupyter notebook workflow automation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/jupyter-notebook-workflow-automation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6099

  Knime workflow orchestration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/knime-workflow-orchestration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6100

  Lcms workflow orchestration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/lcms-workflow-orchestration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6101

  Library integration workflow

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/library-integration-workflow · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6102

  Mass spectrometry workflow orchestration snakemake

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/mass-spectrometry-workflow-orchestration-snakemake · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6103

  Mass spectrometry workflow orchestration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/mass-spectrometry-workflow-orchestration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6104

  Metabolite identity ground truth validation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/metabolite-identity-ground-truth-validation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6105

  Metabolomics functional prediction workflow validation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/metabolomics-functional-prediction-workflow-validation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6106

  Natural products workflow orchestration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/natural-products-workflow-orchestration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6107

  Nextflow workflow execution

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/nextflow-workflow-execution · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6108

  Nontargeted analysis workflow execution

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/nontargeted-analysis-workflow-execution · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6109

  Python workflow execution and orchestration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/python-workflow-execution-and-orchestration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6110

  Python workflow scripting

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/python-workflow-scripting · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6111

  R bioconductor workflow orchestration

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/r-bioconductor-workflow-orchestration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6112

  R workflow implementation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/r-workflow-implementation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6113

  R workflow scripting for analytical chemistry

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/r-workflow-scripting-for-analytical-chemistry · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6114

  Separation technique workflow alignment

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/separation-technique-workflow-alignment · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6115

  Spectral library integration workflow

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/spectral-library-integration-workflow · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6116

  Spectral workflow validation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/spectral-workflow-validation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6117

  Untargeted metabolomics workflow implementation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/untargeted-metabolomics-workflow-implementation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6118

  Workflow architecture documentation

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-architecture-documentation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6119

  Workflow branching logic design

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-branching-logic-design · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6120

  Workflow configuration and parameterization

  HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-configuration-and-parameterization · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder