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Architecture & codebase

12,991 rows, by stacks then stars

1,109 of these skill files have been read, by 811 distinct authors, and what they tell an agent counted. What Architecture & codebase authors agree on, and what they forbid

  • Simulation control loop architecture

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/simulation-control-loop-architecture Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Software architecture documentation review

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/software-architecture-documentation-review Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Toml configuration file preparation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/toml-configuration-file-preparation Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Unified api design for heterogeneous data sources

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/unified-api-design-for-heterogeneous-data-sources Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Workflow routing configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ion-mobility/skills/workflow-routing-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Bioconductor backend architecture design

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/bioconductor-backend-architecture-design Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cnn transformer hybrid architecture design

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/cnn-transformer-hybrid-architecture-design Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Command line interface configuration and automation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/command-line-interface-configuration-and-automation Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Computational environment configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/computational-environment-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Configuration driven batch processing

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/configuration-driven-batch-processing Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Configuration file modification

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/configuration-file-modification Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Configuration file validation dynaconf

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/configuration-file-validation-dynaconf Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Feedforward neural network architecture design

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/feedforward-neural-network-architecture-design Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Fixed architecture layer validation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/fixed-architecture-layer-validation Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Formula sampler configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/formula-sampler-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Formula transformer architecture application

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/formula-transformer-architecture-application Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Gnn architecture design for molecular graphs

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/gnn-architecture-design-for-molecular-graphs Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Gpu acceleration cuda configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/gpu-acceleration-cuda-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Graph neural network architecture assembly

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/graph-neural-network-architecture-assembly Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Hyperparameter sweep configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/hyperparameter-sweep-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Inference model cpu thread configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/inference-model-cpu-thread-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Jpa module execution and configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/jpa-module-execution-and-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Lc ms data pipeline architecture

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/lc-ms-data-pipeline-architecture Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Mass spectrometer simulator configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/mass-spectrometer-simulator-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Memo ms api usage and parameter configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/memo-ms-api-usage-and-parameter-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Metabolite annotation network architecture

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/metabolite-annotation-network-architecture Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Metabolomics peak detection configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/metabolomics-peak-detection-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Modular fragmentor interface configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/modular-fragmentor-interface-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Module dispatch architecture analysis

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/module-dispatch-architecture-analysis Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Molecular networking parameter configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/molecular-networking-parameter-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Msconvert parameter configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/msconvert-parameter-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Msexperiment backend configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/msexperiment-backend-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Mz retention time tolerance parameter configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/mz-retention-time-tolerance-parameter-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Mzmine batch processing configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/mzmine-batch-processing-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Neural network architecture design spectra

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/neural-network-architecture-design-spectra Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Neural network architecture design

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/neural-network-architecture-design Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Neural network architecture training

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/neural-network-architecture-training Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Neural network regularization configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/neural-network-regularization-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Nextflow pipeline configuration hpc

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/nextflow-pipeline-configuration-hpc Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Notification configuration management

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/notification-configuration-management Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Peak picking parameter configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/peak-picking-parameter-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Siamese architecture module integration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/siamese-architecture-module-integration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Siamese architecture scoring

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/siamese-architecture-scoring Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Siamese network architecture modification

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/siamese-network-architecture-modification Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Signal apodization configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/signal-apodization-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Simulation control loop architecture

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/simulation-control-loop-architecture Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Singularity container backend setup

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/singularity-container-backend-setup Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Software architecture documentation review

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/software-architecture-documentation-review Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • System environment configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/system-environment-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Targeted peak integration configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/targeted-peak-integration-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Transformer architecture implementation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/transformer-architecture-implementation Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Transformer encoder architecture design

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/transformer-encoder-architecture-design Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Transformer encoder architecture training

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/transformer-encoder-architecture-training Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Vimms controller configuration and execution

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/vimms-controller-configuration-and-execution Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Virtual mass spectrometer configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/virtual-mass-spectrometer-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Workflow architecture documentation

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-architecture-documentation Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Workflow configuration and parameterization

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-configuration-and-parameterization Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Workflow routing configuration

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/workflow-routing-configuration Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Yaml configuration handling

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/lc-ms/skills/yaml-configuration-handling Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

  • Cnn architecture design for spectral data

    HolobiomicsLab/asb-skill-collections/packs/metabolomics/ms-generic/skills/cnn-architecture-design-for-spectral-data Skill

    14★ repo

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder