1,109 of these skill files have been read, by 811 distinct authors, and what they tell an agent counted. What Architecture & codebase authors agree on, and what they forbid

• 6121

  Jndi binding setup

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/jndi-binding-setup · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6122

  Jpa module execution and configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/jpa-module-execution-and-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6123

  Json configuration parsing

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/json-configuration-parsing · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6124

  Lc ms data pipeline architecture

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/lc-ms-data-pipeline-architecture · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6125

  Mass spectrometer simulator configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/mass-spectrometer-simulator-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6126

  Memo ms api usage and parameter configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/memo-ms-api-usage-and-parameter-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6127

  Message passing neural network architecture design

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/message-passing-neural-network-architecture-design · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6128

  Metabolite annotation network architecture

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/metabolite-annotation-network-architecture · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6129

  Metabolomics peak detection configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/metabolomics-peak-detection-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6130

  Modular fragmentor interface configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/modular-fragmentor-interface-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6131

  Modulation parameter configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/modulation-parameter-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6132

  Module dispatch architecture analysis

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/module-dispatch-architecture-analysis · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6133

  Module refactoring and legacy code removal

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/module-refactoring-and-legacy-code-removal · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6134

  Molecular networking parameter configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/molecular-networking-parameter-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6135

  Msconvert parameter configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/msconvert-parameter-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6136

  Msconvert tool configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/msconvert-tool-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6137

  Msconvert workflow configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/msconvert-workflow-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6138

  Msexperiment backend configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/msexperiment-backend-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6139

  Msi preprocessing parameter configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/msi-preprocessing-parameter-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6140

  Multistage neural architecture training

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/multistage-neural-architecture-training · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6141

  Mz retention time tolerance parameter configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/mz-retention-time-tolerance-parameter-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6142

  Mzmine batch processing configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/mzmine-batch-processing-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6143

  Neural network architecture design spectra

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/neural-network-architecture-design-spectra · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6144

  Neural network architecture design

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/neural-network-architecture-design · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6145

  Neural network architecture extension

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/neural-network-architecture-extension · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6146

  Neural network architecture instantiation

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/neural-network-architecture-instantiation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6147

  Neural network architecture training

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/neural-network-architecture-training · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6148

  Neural network module architecture design

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/neural-network-module-architecture-design · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6149

  Neural network regularization configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/neural-network-regularization-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6150

  Nextflow pipeline configuration hpc

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/nextflow-pipeline-configuration-hpc · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6151

  Notification configuration management

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/notification-configuration-management · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6152

  Orchestrator architecture design

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/orchestrator-architecture-design · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6153

  Package manager environment setup

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/package-manager-environment-setup · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6154

  Parameter configuration conditional logic

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/parameter-configuration-conditional-logic · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6155

  Peak picking parameter configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/peak-picking-parameter-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6156

  Plate layout parameter configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/plate-layout-parameter-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6157

  Platform specific code refactoring

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/platform-specific-code-refactoring · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6158

  Port mapping configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/port-mapping-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6159

  Pull request change tracking

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/pull-request-change-tracking · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6160

  Python environment configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/python-environment-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6161

  Python environment setup and reproducibility

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/python-environment-setup-and-reproducibility · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6162

  Python environment setup

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/python-environment-setup · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6163

  Python package environment setup

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/python-package-environment-setup · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6164

  Python package migration and refactoring

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/python-package-migration-and-refactoring · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6165

  Quality control metric threshold configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/quality-control-metric-threshold-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6166

  Quantitative mode metabolomics configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/quantitative-mode-metabolomics-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6167

  R package parameter configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/r-package-parameter-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6168

  R parallel backend configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/r-parallel-backend-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6169

  R script configuration and editing

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/r-script-configuration-and-editing · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6170

  Repository cloning and setup

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/repository-cloning-and-setup · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6171

  Repository environment setup

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/repository-environment-setup · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6172

  Repository source code setup

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/repository-source-code-setup · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6173

  Resnet architecture modification for dimensionality control

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/resnet-architecture-modification-for-dimensionality-control · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6174

  Rest api contract documentation

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/rest-api-contract-documentation · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6175

  Saturation threshold configuration

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/saturation-threshold-configuration · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6176

  Scaffold extraction from molecular structures

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/scaffold-extraction-from-molecular-structures · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6177

  Search mode configuration optimization

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/search-mode-configuration-optimization · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6178

  Sequence to sequence architecture design

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/sequence-to-sequence-architecture-design · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6179

  Shell environment setup and dependency management

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/shell-environment-setup-and-dependency-management · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

• 6180

  Shiny app configuration deployment

  HolobiomicsLab/asb-skill-collections/collections/metabolomics/v2/skills/shiny-app-configuration-deployment · Skill

  14★ repo

  Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder