Verify results

Verify Results

Close the loop between what the paper claims and what the artifact produces. This skill helps the author confirm their reported numbers reproduce: it locates the experiment code, helps stand up a clean/sandboxed run, runs the artifact's own tests, and does a consistency audit — comparing the metrics the run produces against the paper's tables and claims, within a tolerance that does not change the paper's conclusions. It reports mismatches (paper says X, code produces Y) and missing reproduction steps, and audits the artifact against current reproducibility-badge expectations.

It is a copilot: it sets up and guides, and the author runs anything heavy (training, long evals) in their own environment. It never fabricates a number, never executes destructive commands, and never claims a result was independently reproduced — a clean audit means consistent, not reproduced.

When to use

• "Do my results reproduce?" / "Does my code match the paper's tables?"
• "Check my reproducibility" / "verify my experiments" / "reproduce my numbers".
• Prepping an artifact for an evaluation track (ACM AE, USENIX, OSDI, SOSP, SIGMOD ARI, ETAPS, NeurIPS/ICML/ACL reproducibility).
• Filling a reproducibility checklist (NeurIPS Paper Checklist, ACL Responsible NLP, ML Code Completeness) and wanting an honest read on each item.
• After a results table changes and you need to confirm the code still produces it.

Inputs

1. The artifact / experiment code (a directory; a repo URL the author has cloned locally — this skill reads local files, it does not clone for you).
2. The paper .tex whose tables/claims are being checked (or the specific \input file that holds the results table).
3. The target venue's artifact track, if any — its current Call for Artifacts decides which badges exist and what hosting they require.
4. Optionally, a metrics file from a prior run (JSON/CSV) to compare without re-running.

Process

This skill follows plan → set up → run (author) → audit, with the verification step grounded in external, measurable signals (test pass/fail, a numeric diff against a file the run produced) — never the model's own judgment that the numbers "look right".

1. Locate the experiment code and the claims. Confirm where the code lives and which paper tables/claims it is supposed to produce. Extract the paper's reported numbers into a reviewable claims ledger:

   python3 scripts/extract_claims.py paper.tex --ledger claims.json
   

   The ledger is a starting point, not ground truth — walk it with the author: drop spurious numbers (years, citation counts, the top-1=1 from a \\ row), fix metric labels, mark each kept claim confirmed. The author is the author.

2. Audit the artifact for completeness and badge-readiness.

   python3 scripts/audit_repo.py path/to/artifact --blind <single|double|none>
   

   This inventories the repo against the ML Code Completeness Checklist (dependencies, training code, evaluation code, pretrained models, a README with a results table + exact reproduce command), checks for the artifact's own tests, flags missing reproduction steps, and warns when the only hosting is a GitHub/personal URL (badge tracks want an archival DOI — Zenodo/FigShare/Dryad/Software Heritage). It runs nothing. Under --blind double it also scans the README for de-anonymizing emails/URLs.

   This is a fast pre-comparison gate, not the deep version. Don't re-do work the sibling skills own: making the code run-ready/deterministic and the repro-essentials audit belong to test-research-code; packaging, the badge taxonomy, and the archival DOI belong to prepare-artifacts; the deep double-blind sweep belongs to anonymize-paper / refactor-research-code. The unique job of this skill is the consistency audit (step 5) — does the run's output match the paper's tables. Use audit_repo.py only to confirm there is enough to run before comparing, then hand deep gaps to the owner skill.

3. Re-verify the badge rules against the live Call for Artifacts — mandatory. Badge offerings change per venue, per year (e.g. one cycle a venue offers all three badges; another, only Artifacts Available). The terms Reproduced vs Replicated were swapped by ACM after 2020-05-14 — pre-2020 papers use the inverse meanings. Do not state any badge requirement, hosting rule, or deadline from memory: fetch the venue's current CFA and confirm it with a source URL and access date. Reproducibility standards and the badge taxonomy are in references/repro-standards.md — treat it as a map of what to verify, not as current truth.

4. Set up a clean, sandboxed run — then hand the author the commands. A reproduction must run from a pinned, isolated environment, not the author's polluted shell. Help build the recipe (fresh venv/conda/container from the dependency spec; seeds fixed; the exact command from the README), but the author runs anything heavy. See references/sandbox-and-run.md. First have the author run the artifact's own tests (pytest, make test, the repo's harness) — a concrete pass/fail gate before any metric comparison. Never run destructive commands; never auto-install into the author's base environment.

5. Consistency audit: compare produced metrics to the paper. Point the run's output (a metrics JSON/CSV the author generated) at the confirmed ledger:

   python3 scripts/compare_metrics.py --ledger claims.json --metrics run.json \
       --rel-tol 0.01 --abs-tol 0.005 [--map test_acc=c1 ...]
   

   It reports MATCH / MISMATCH / MISSING per claim with a tolerance that does not change the paper's claim — never bit-exact (ACM, SIGMOD ARI, and ETAPS all require only agreement within tolerance / "similar behavior"). Tune --rel-tol/--abs-tol to the metric's scale and use --map when names differ. A metric/no-produced-value is a missing repro step (the paper reports it; the run didn't emit it).

6. Decide the verification outcome with explicit stop conditions. Map each compared claim to: match (consistent within tolerance), mismatch (paper says X, code produces Y — reconcile: stale table? wrong seed? different split? selective reporting?), or unverified (could not run / metric not emitted — say so, never paper over it). Do not loop indefinitely: stop when all confirmed claims are match-or-explained, or escalate to the author when a mismatch needs a judgment call (which number is right). Escalation is a feature, not a failure (working-principle #4).

7. Write the reproduction report to paper-workspace/review/reproduction-report.md and append a line to paper-workspace/INDEX.md. Lead with the verdict (N of M claims consistent), then the mismatch table (claim, paper value, produced value, |diff|, likely cause), the artifact-completeness checklist with each item's status, missing repro steps, and badge-readiness per the live CFA. State plainly what was and was not actually run.

Output

A reproduction-report.md: verdict (consistent claims / total) → mismatch table (paper vs produced, with diffs and suspected cause) → artifact completeness checklist (5 items + tests + hosting) → missing reproduction steps → badge-readiness against the live CFA (with source links and dates). Plus the machine-readable claims.json ledger and the --json outputs if requested.

Adapt to your discipline

The metric heuristics target ML/systems papers (accuracy, F1, BLEU, latency, speedup...). For other fields, the ledger is just {metric, value} records — hand-author it for any quantitative claim (effect sizes, p-values, runtimes) and compare_metrics.py still does the tolerance-aware audit. Non-code artifacts (datasets, proofs) use steps 2–3 only.

Related skills (don't duplicate them)

This skill's one unique job is the consistency audit: does the run's output match the paper's reported numbers. Everything adjacent has an owner — hand it off rather than re-doing it.

Need	Owner skill
Make the code run-ready/deterministic; repro-essentials audit	test-research-code
Packaging, badge taxonomy, archival DOI, artifact appendix	prepare-artifacts
Release cleanup of a research repo	refactor-research-code
Deep, reversible double-blind sweep	anonymize-paper
Each written claim traces to evidence (not just numbers)	verify-claims

audit_repo.py here is a lightweight pre-comparison gate, not a replacement for test-research-code's repro_check.py or prepare-artifacts' badge work.

Guardrails

• Consistency is not reproduction. A clean audit says the produced numbers match the paper within tolerance — it does not mean the result was independently reproduced or replicated. Never claim a badge is earned; that is a committee's call against the live CFA.
• Never fabricate a number, a metric, or a "passing" run. If a run did not happen or a metric was not emitted, report it as unverified — do not infer it.
• Don't trust the model's own read of correctness. The verification signal is external: a test exit code, a numeric diff against a file the author produced. Self-reflection validates hallucinations — do not use it as the gate.
• Run nothing heavy or destructive. The author runs training/long evals in their own sandbox; this skill sets up and guides. No installs into the base env, no rm, no network side effects.
• Anonymization-aware. Under double-blind, flag identifying content in the artifact and prefer an anonymized mirror; never expose the author's identity.
• Never submit the paper or the artifact to any system on the author's behalf.

Memory

Uses the shared .paper-memory/ convention (full spec: paper-memory-convention.md).

• At start: read .paper-memory/lessons.md (and profile.yml for the contribution type — a dataset/system paper is judged on the artifact more heavily). Lead with any recurring repro habits (e.g. "tables drift from the code between drafts", "unpinned dependencies").
• At end: append each finding worth remembering as one dated entry in the shared format - [YYYY-MM-DD] (verify-results | <scope>) issue -> recommendation (use reflect-and-improve's reflect_log.py append, which dedupes and dates). Tag a cross-paper habit recurring, a one-off this-paper.
• Create .paper-memory/ on demand and offer to add it to .gitignore. It is local-only; never upload it or copy it into this repo.