Matlab read database
Skill matlab/matlab-agentic-toolkit/skills-catalog/reporting-and-database-access/matlab-read-database
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Reads data from relational databases using MATLAB Database Toolbox pushdown capabilities. Use when importing data from JDBC/ODBC databases, filtering rows, selecting columns, excluding duplicates, joining database tables, using sqlread, fetch, sqlinnerjoin, sqlouterjoin, databaseImportOptions, or rowfilter.
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SKILL.md
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MATLAB Database Toolbox Pushdown Architect
Use when importing data from relational databases with MATLAB Database Toolbox's pushdown capabilities — offloading row filtering, column selection, duplicate exclusion, and joins to the database instead of processing in MATLAB.
When to Use This Skill
- Importing data from a database table or an SQL query as a MATLAB table
- Filtering rows from a database table or an SQL query
- Selecting specific columns from a database table or an SQL query
- Excluding duplicate rows in a database table or an SQL query
- Joining two database tables
- Combining joins with filtering or column selection
- User mentions keywords: import, sqlread, fetch, filter, rowfilter, join, sqlinnerjoin, sqlouterjoin, duplicates, databaseImportOptions, pushdown
When NOT to Use
- Writing/inserting data into a database — use
sqlwrite/sqlupdate/executepatterns instead - Data too large to fit in memory — use
DatabaseDatastore+ tall arrays orsplitsqlquery - Object-oriented reads with class mapping — use ORM (
ormreadwithMappableclasses) - MongoDB, Cassandra, or Neo4j queries — pushdown functions only work with relational databases
Critical Rules
Pushdown Strategy
- ALWAYS use
sqlreadfor tables,fetchfor SQL queries. - ALWAYS use
RowFilterto push row filtering to the database. NEVER import all rows and filter in MATLAB. - ALWAYS use
databaseImportOptionswithSelectedVariableNameswhen only a subset of columns is needed. - ALWAYS verify the connection with
isopen(conn)before operations and callclose(conn)when done.
Joins
- ALWAYS use
sqlinnerjoin/sqlouterjoinfor joining exactly 2 database tables. - NEVER pass
databaseImportOptions(opts) tosqlinnerjoinorsqlouterjoin— they do not accept it. Select columns in MATLAB after the join, or usefetchwith explicit SQL. - NEVER use pushdown joins for 3+ tables or joins with aggregation — use
fetchwith explicit SQL instead.
Function Reference
What Each Function Accepts
| Function | Accepts opts? | Accepts RowFilter? | Accepts MaxRows? | Column Selection |
|---|---|---|---|---|
sqlread | Yes | Yes | Yes | Via opts.SelectedVariableNames |
fetch | Yes | Yes | Yes | Via opts.SelectedVariableNames |
sqlinnerjoin | No | Yes | Yes | Not supported — select columns after join |
sqlouterjoin | No | Yes | Yes | Not supported — select columns after join |
For full parameter details, see reference/cards/pushdown-joins.md and reference/cards/import-options.md.
Decision Framework
Which function should I use?
| Situation | Use | Why |
|---|---|---|
| Import from a single table | sqlread | Pushes filters/column selection to DB |
| Import from a SQL query | fetch | Executes arbitrary SQL on DB |
| Join exactly 2 tables (no column selection needed) | sqlinnerjoin / sqlouterjoin | Join executes on DB |
| Join 2 tables + select specific columns | sqlinnerjoin + MATLAB column selection | Join functions don't accept opts |
| Join 2 tables + column selection + deduplication | fetch with explicit SQL | Pushdown joins can't handle opts or DISTINCT |
| Join 3+ tables or use aggregation | fetch with explicit SQL | Pushdown joins limited to 2 tables |
Need ExcludeDuplicates | sqlread/fetch with opts | Only these accept databaseImportOptions |
Complete Examples
See knowledge cards for detailed examples:
- Single table import with filtering:
reference/cards/sqlread-fetch.md - Column selection and deduplication:
reference/cards/import-options.md - Two-table joins with filtering:
reference/cards/pushdown-joins.md - Complex multi-table joins:
reference/cards/pushdown-joins.md(Fall Back to SQL section)
Common Mistakes
% INCORRECT — passing import options to join functions (error!)
opts = databaseImportOptions(conn, "orders");
result = sqlinnerjoin(conn, "orders", "items", opts); % Error!
% CORRECT — join first, then select columns from the result
result = sqlinnerjoin(conn, "orders", "items", Keys="order_id");
result = result(:, ["order_id", "product", "quantity", "total"]);
% INCORRECT — using fetch without pushdown (pulls all data, filters in MATLAB)
data = fetch(conn, "SELECT * FROM orders");
filtered = data(data.total > 100, :);
% CORRECT — push the filter to the database
opts = databaseImportOptions(conn, "orders");
opts.RowFilter = opts.RowFilter.total > 100;
data = sqlread(conn, "orders", opts);
Best Practices
- Use
RowFilteras a name-value argument directly onsqlread/fetch/sqlinnerjoin/sqlouterjoinfor simple filtering. Useopts.RowFilterwhen you also need column selection or deduplication. - When layering
RowFilteron a SQL query infetch, theRowFilteradds conditions on top of the SQLWHEREclause. Avoid duplicating the same condition in both. - Prefer
sqlinnerjoin/sqlouterjoinover writing JOIN SQL manually when working with exactly 2 tables and no column selection or aggregation is needed. - For join + column selection, choose based on data volume: if the extra columns are small, join then select in MATLAB. If the table is wide and data is large, use
fetchwith explicit SQL to select columns on the database. - For tables with >50 columns, always use
SelectedVariableNamesto limit columns. For result sets >100K rows that don't fit in memory, useDatabaseDatastorewith tall arrays orsplitsqlqueryfor out-of-memory processing.
Common Patterns
Pattern 1: Single Table — Filter + Select Columns
opts = databaseImportOptions(conn, "orders");
opts.SelectedVariableNames = ["OrderKey", "OrderStatus"];
opts.RowFilter = opts.RowFilter.OrderPriority == "URGENT";
T = sqlread(conn, "orders", opts);
Pattern 2: Two Table Join — Filter Only
rf = rowfilter("ShipMode");
T = sqlinnerjoin(conn, "orders", "lineitem", Keys="OrderKey", RowFilter=rf.ShipMode == "AIR");
Pattern 3: Two Table Join — Filter + Select Columns (Post-Join)
rf = rowfilter(["OrderPriority", "ShipMode"]);
T = sqlinnerjoin(conn, "orders", "lineitem", Keys="OrderKey", ...
RowFilter=rf.OrderPriority == "URGENT" & rf.ShipMode == "AIR");
result = T(:, ["OrderKey", "OrderStatus"]);
Pattern 4: Fall Back to SQL for Complex Queries
sqlquery = "SELECT o.OrderKey, o.OrderStatus " + ...
"FROM orders o INNER JOIN lineitem l ON o.OrderKey = l.OrderKey " + ...
"WHERE o.OrderPriority = 'URGENT' AND l.ShipMode = 'AIR'";
T = fetch(conn, sqlquery);
Pattern 5: Safe Import with Error Handling
try
opts = databaseImportOptions(conn, "orders");
opts.SelectedVariableNames = ["id", "total", "status"];
opts.RowFilter = opts.RowFilter.total > 100;
data = sqlread(conn, "orders", opts);
catch ME
warning("Import failed: %s", ME.message);
data = table.empty;
end
Checklist
Before finalizing pushdown import code, verify:
-
sqlreadused for database tables,fetchused for SQL queries - Row filters use
RowFilterparameter (pushed to database), not client-side filtering - Only needed columns selected via
databaseImportOptionswithSelectedVariableNames -
databaseImportOptionsis NOT passed tosqlinnerjoinorsqlouterjoin -
ExcludeDuplicatesused instead of MATLABunique()for deduplication - Joins use
sqlinnerjoin/sqlouterjoin(limited to 2 tables, noopts) - Complex queries (3+ tables, aggregation, join + column selection) use
fetchwith SQL -
isopen(conn)checked after connection attempt -
close(conn)called at the end
Troubleshooting
Issue: sqlinnerjoin errors when passing databaseImportOptions
- Solution:
sqlinnerjoinandsqlouterjoindo not acceptdatabaseImportOptions. Removeoptsfrom the call. Select columns in MATLAB after the join, or usefetchwith explicit SQL.
Issue: RowFilter has no effect — all rows are still returned
- Solution: Verify the column name in
rowfilter("ColName")matches the database column exactly (case-sensitive for some databases).
Issue: sqlinnerjoin errors with "Key variable not found"
- Solution: The
Keysvalue must match a column name that exists in both tables. Usesqlfind(conn, "tableName")to inspect column names.
Issue: databaseImportOptions errors on a SQL query
- Solution: Ensure the SQL query is valid and returns results.
databaseImportOptionsexecutes a metadata query — if the base query has syntax errors, it will fail.
Issue: ExcludeDuplicates doesn't remove duplicates as expected
- Solution:
ExcludeDuplicatesapplies to the combination of all selected variables. UseSelectedVariableNamesto narrow the columns first, then setExcludeDuplicates = true.
Issue: sqlouterjoin returns unexpected NULLs
- Solution: Outer joins include non-matching rows filled with NULLs. This is expected SQL behavior. Use
RowFilterto exclude rows post-join, or switch tosqlinnerjoinif you only want matching rows.
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