Md
Skill jinzhezenggroup/computational-chemistry-agent-skills/quantum-chemistry/dft-cp2k/md
Prepare CP2K molecular-dynamics task inputs from a user-provided structure and MD controls. Use when the user needs finite-temperature trajectories with explicit ensemble, timestep, and thermostat/barostat settings.From its SKILL.md
npx -y skills add jinzhezenggroup/computational-chemistry-agent-skills --skill mdAssembled from the repository path, not quoted from the project. Check it against their README if it does not work.
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SKILL.md
1.2 KB, 172 tokens by cl100k_base, as published. Nobody here has run it
CP2K MD (Subskill)
Scope
This skill prepares MD tasks only.
It should generate:
- MD-capable CP2K input
- ensemble/integrator/thermostat controls
- trajectory/output policy
It should not submit or execute jobs.
Must provide
- structure input
- basis/potential set choice
- timestep and number of steps
- ensemble intent (
NVE/NVT/NPT) - temperature/pressure control policy
Usually should be explicit
- initial velocity policy
- output stride for energies/trajectory
- charge/spin and SCF policy
Expected output
- MD-task input layout
- MD control summary and assumptions
- unresolved choices for confirmation
- handoff note to
dpdisp-submitif execution is requested
What ships with it
Read from the repository
Just SKILL.md. No reference files, no scripts.