agentsclimarketplace

Scientific slides

Skill jaechang-hits/SciAgent-Skills/skills/scientific-writing/scientific-slides

197 bioinformatics & life science skills for Claude Code and AI agents — BixBench 92.0% accuracy. RNA-seq, single-cell, drug discovery, proteomics, and more. Powers OmicsHorizon.

Install
npx -y skills add jaechang-hits/SciAgent-Skills --skill scientific-slides

Assembled from the repository path, not quoted from the project. Check it against their README if it does not work.

One thing to look at

  • no licenseNo license file was found in the repository. Code published without one is not open source by default, so using it at work is a question for whoever answers licensing questions where you are.

What its author says it does

Copied from the file, not written here

Scientific presentations for conferences, seminars, thesis defenses, and grant pitches. Slide design, talk structure, timing, data viz for slides, QA. PowerPoint and LaTeX Beamer. For posters use latex-research-posters.

The file declares its own license as CC-BY-4.0. That is the author’s claim about this one file, and it is not the same thing as the license GitHub reports for the repository, which is listed with the other numbers below.

SKILL.md

13.8 KB, as published. Nobody here has run it

Scientific Slides — Presentation Design and Delivery

Overview

Scientific presentations are a critical medium for communicating research at conferences, seminars, defenses, and professional talks. This knowhow covers end-to-end presentation development: structure and content planning, visual design principles, data visualization adaptation, timing and pacing, and quality assurance across PowerPoint and LaTeX Beamer formats.

Key Concepts

1. Talk Types and Their Requirements

Talk TypeDurationSlidesFocusKey Finding Count
Conference talk10–20 min12–201–2 key findings1–2
Academic seminar45–60 min40–60Comprehensive coverage3–6
Thesis defense45–60 min45–65Full dissertationAll studies
Grant pitch10–20 min12–18Significance + feasibilityPreliminary data
Journal club20–45 min20–40Critical analysisPaper's findings

2. Visual Design Principles

Visual-first approach: Start with visuals (figures, diagrams, images), then add text as support. Target 60–70% visual content, 30–40% text. Every slide should have a strong visual element.

Typography:

  • Title: 36–44 pt, bold, sans-serif (Arial, Calibri, Helvetica)
  • Body: 24–28 pt (not just 18 pt minimum — aim higher for readability)
  • Captions/annotations: 18–20 pt
  • Maximum 2–3 font families

Color:

  • Select a modern palette matching your topic (biotech = vibrant, physics = sleek darks, health = warm tones)
  • 3–5 colors total with high contrast (7:1 preferred)
  • Color-blind safe (avoid red-green combinations)
  • Do NOT use default PowerPoint/Beamer themes without customization

Layout:

  • One main idea per slide
  • 40–50% white space
  • Vary layouts: full-figure, two-column (text + figure), visual overlay (not all bullet lists)
  • Asymmetric compositions (more engaging than centered)
  • Rule of thirds for focal points

3. Data Visualization for Slides

Key differences from journal figures:

  • Simplify: fewer panels per slide, split complex figures across slides
  • Enlarge: 18–24 pt minimum for labels (larger than journal standard)
  • Direct label: put labels on the data, not in legends
  • Emphasize: use color and size to highlight key findings
  • Progressive disclosure: reveal data incrementally for complex figures
Chart TypeBest ForSlide Adaptation
Bar chartCategory comparisonMax 6–8 bars, large labels
Line graphTrends over timeBold lines, 2–3 series max
Scatter plotCorrelationsLarge points, trend line
HeatmapMatrix patternsHigh contrast, annotate key cells
FlowchartMethodologyBuild step-by-step with animations

4. Universal Story Arc

Every scientific talk follows this narrative structure:

  1. Hook — grab attention (30–60 seconds)
  2. Context — establish importance (5–10% of talk)
  3. Problem/Gap — identify what's unknown (5–10%)
  4. Approach — explain your solution (15–25%)
  5. Results — present key findings (40–50%)
  6. Implications — discuss meaning (15–20%)
  7. Closure — memorable conclusion (1–2 minutes)

Decision Framework

Implementation Tool Selection

Start: What is your priority?
├── Mathematical content, equations, version control?
│   └── YES → LaTeX Beamer (see assets/beamer templates)
├── Editable slides, company templates, animations?
│   └── YES → PowerPoint (programmatic or template-based)
├── Fast creation, non-technical audience, visual impact?
│   └── YES → PowerPoint or image-based PDF
└── Not sure
    └── PowerPoint (most flexible default)

Slide Count Decision Table

DurationSimple TopicAverageComplex Topic
5 min5–66–85–7
10 min10–1212–1410–12
15 min14–1616–1814–16
30 min25–3030–3525–30
45 min38–4545–5038–45
60 min50–5555–6550–60

General rule: ~1 slide per minute. Complex slides (results, methodology) may take 2–3 minutes; simple slides (transitions, section dividers) take 15–30 seconds.

Time Allocation

Section% of Time15-min Talk45-min Talk
Introduction15–20%2–3 min7–9 min
Methods15–20%2–3 min7–9 min
Results40–50%6–7 min18–22 min
Discussion15–20%2–3 min7–9 min
Conclusion5%45 sec2 min

Best Practices

  1. MANDATORY: Every slide must have a strong visual element — figure, chart, diagram, image, or icon. Text-only bullet list slides fail to communicate science effectively. Target minimum 2 visual elements per content slide.

  2. MANDATORY: Practice with a timer at least 3 times before presenting. Set timing checkpoints: for a 15-minute talk, check at 3–4 min (finishing intro), 7–8 min (midway through results), 12–13 min (starting conclusions).

  3. Use minimal text as visual support. 3–4 bullets per slide, 4–6 words per bullet. Text is the supporting role; visuals are the stars. Never put full paragraphs on slides.

  4. Include proper citations. Cite 3–5 papers in the introduction (establishing context) and 3–5 in the discussion (comparison). Use author-year format (Smith et al., 2023) for readability.

  5. Design section dividers with visual breaks. Insert visually distinctive slides between major sections (intro → methods → results → conclusion). These help the audience reset and follow the narrative.

  6. Anti-pattern — using default templates without customization. Default PowerPoint/Beamer themes signal "minimal effort." Choose a modern color palette, customize fonts, and add visual personality matching your topic.

  7. Simplify journal figures for slides. Increase all labels to 18–24 pt, remove non-essential panels, use direct labeling instead of legends, emphasize the key finding with color or annotation.

  8. Anti-pattern — cramming full paper content into slides. A 15-minute talk should cover 1–2 key findings, not the entire paper. Leave details for the written paper and prepare backup slides for Q&A.

  9. Prepare backup slides. Put additional data, detailed methods, alternative analyses after the "Thank You" slide. Reference them during Q&A without disrupting the main talk flow.

  10. Never skip conclusions. If running behind, cut earlier content (skip a results slide or compress methods). The conclusion is the audience's take-away message — skipping it wastes the entire talk.

Common Pitfalls

  1. Text-heavy, visual-poor slides. Walls of text, no images or graphics, bullet points as the only content. How to avoid: Start slide creation with visuals first (which figure/diagram?), then add minimal text as support.

  2. Font sizes too small (under 24pt body text). Back-row audience can't read, slides look cramped. How to avoid: Set body text to 24–28 pt, titles to 36–44 pt. Test by viewing slides at 50% zoom — if you can't read it, the audience can't either.

  3. Too many findings for the time slot. Trying to present 5 findings in a 15-minute talk rushes everything. How to avoid: Conference talks = 1–2 findings. Seminars = 3–5. Choose ruthlessly.

  4. Missing research context (no citations). Claims without supporting literature undermine credibility. How to avoid: Search literature before creating slides. Cite 3–5 papers in intro and 3–5 in discussion.

  5. Inconsistent formatting across slides. Different fonts, colors, and layouts from slide to slide look unprofessional. How to avoid: Use master slides/templates. Define your color palette, fonts, and layout grid before starting content.

  6. Low contrast text on background. Light gray text on white, or colored text on busy images. How to avoid: Ensure text-background contrast ratio ≥ 7:1. Use solid color overlays on image backgrounds.

  7. Not practicing with timer. First run-through is during the actual presentation, causing time overruns. How to avoid: Practice minimum 3 times. Mark timing checkpoints on your notes.

  8. Skipping conclusions when running over time. Rushing through or omitting the take-away message. How to avoid: Cut earlier content (a results slide) rather than the conclusion. Prepare a "Plan B" with marked skip-able slides.

Workflow

Stage 1: Planning

  1. Define context: talk type (conference/seminar/defense), duration, audience (specialist/general/mixed), venue (room size, virtual/in-person)
  2. Develop content outline: identify 1–3 core messages, select 3–6 key figures, allocate time per section
  3. Search literature: find 8–15 relevant papers for citations (3–5 for introduction context, 3–5 for discussion comparison)
  4. Choose implementation tool: PowerPoint (editable, animations, company templates) vs. LaTeX Beamer (equations, version control, mathematical content)
  5. Plan slide-by-slide: title, key points, visual element for each slide

Stage 2: Design and Creation

  1. Start from template (see Companion Assets for Beamer; use master slides for PowerPoint)
  2. Select modern color palette: match your topic — 3–5 colors with high contrast
  3. Configure typography: sans-serif, 24–28 pt body, 36–44 pt titles
  4. Create varied layouts: mix full-figure slides, two-column (text + figure), visual overlays
  5. Add section dividers: visually distinctive slides between major sections

Stage 3: Content Development

  1. Visual backbone first: place all figures, charts, diagrams, images before adding text
  2. Generate figures: create presentation-appropriate plots using matplotlib, plotly, or seaborn — larger fonts (18–24 pt labels), fewer panels, direct labeling, high contrast
  3. Add minimal text: bullet points complement visuals, don't replace them
  4. Include citations: author-year format on relevant slides (small text, bottom or near data)
  5. Add transitions: control information flow with builds for complex slides
  6. Prepare presentation aids: for physical presentations, bring backup copies, adapters, handouts

Stage 4: Validation and Refinement

  1. Visual inspection: check each slide for text overflow, element overlap, font sizes, contrast
  2. Readability test: view at 50% zoom — everything should still be readable
  3. Content review: verify narrative flow, one idea per slide, consistent formatting
  4. Peer review: ask colleague for 30-second test (can they identify the main message?)
  5. Compilation check (Beamer): verify no LaTeX warnings, all figures render correctly

Stage 5: Practice and Delivery

  1. Practice 3–5 times with timer: run 1 (rough), run 2 (smooth transitions), run 3 (exact timing), run 4+ (polish)
  2. Set timing checkpoints: mark 3–4 points on notes (e.g., "should be here by 4 min")
  3. Practice transitions: connecting phrases between sections
  4. Prepare for Q&A: anticipate questions, prepare backup slides with additional data
  5. Final checks: multiple copies (laptop, cloud, USB), test on presentation computer, backup PDF

Protocol Guidelines

LaTeX Beamer Compilation

# Basic compilation
pdflatex presentation.tex

# With bibliography
pdflatex presentation.tex && bibtex presentation && pdflatex presentation.tex && pdflatex presentation.tex

# Better font support
lualatex presentation.tex

PowerPoint Quality Control

  • Export to PDF and review at 100% zoom
  • Check all slides in Slide Sorter view for consistency
  • Test animations and builds in Slideshow mode
  • Verify file size (< 50 MB for email; compress images if needed)

Bundled Resources

Detailed reference files in references/:

FileContent
talk_types_guide.mdDetailed structure and strategy for each talk type (conference, seminar, defense, grant pitch, journal club) with example outlines
slide_design_guide.mdExtended design principles: color theory, typography tables, layout patterns, accessibility guidelines, Gestalt principles for visual composition

Further Reading

  • Edward Tufte, The Visual Display of Quantitative Information — foundational principles for data visualization
  • Web AIM Contrast Checker — WCAG compliance for slide readability
  • Jean-Luc Doumont, Trees, Maps, and Theorems — structured scientific communication
  • Coblis Color Blindness Simulator — test slide accessibility

Related Skills

  • matplotlib-scientific-plotting — generate publication-quality figures adapted for slide presentation (larger fonts, simplified panels)
  • plotly-interactive-plots — create interactive figures exportable as static images for slides
  • seaborn-statistical-plots — statistical plots with automatic aggregation for results slides
  • latex-research-posters — poster-specific design guidance; shares typography and color principles with slides

Companion Assets

Templates and guides in assets/:

FileDescription
beamer_template_conference.texLaTeX Beamer template for 15-minute conference talks
beamer_template_seminar.texLaTeX Beamer template for 45-minute academic seminars
beamer_template_defense.texLaTeX Beamer template for thesis/dissertation defenses
timing_guidelines.mdComprehensive timing and pacing strategies for all talk types

Keep looking

Skills are one crate of 328,083. Ordering is by how many stacks a row turns up in, so the top of any crate is what has actually been picked rather than what has the most stars.