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Climate science guide

Skill brycewang-stanford/Auto-Empirical-Research-Skills/skills/43-wentorai-research-plugins/skills/domains/geoscience/climate-science-guide

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npx -y skills add brycewang-stanford/Auto-Empirical-Research-Skills --skill climate-science-guide

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Climate data analysis, modeling workflows, and carbon neutrality research met...

SKILL.md

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Climate Science Guide

A research skill for analyzing climate data, working with climate model outputs, and conducting carbon-related studies. Covers data sources, standard analytical workflows, and visualization techniques used in climate science publications.

Climate Data Sources

Observational Datasets

DatasetVariablesResolutionPeriodSource
ERA5Temperature, precipitation, wind, etc.0.25 deg, hourly1940-presentECMWF/Copernicus
GPCPPrecipitation2.5 deg, monthly1979-presentNASA
HadCRUT5Surface temperature anomaly5 deg, monthly1850-presentMet Office
NOAA GHCNStation temperature, precipitationPoint data1850-presentNOAA
CRU TSTemperature, precipitation, vapor pressure0.5 deg, monthly1901-presentUEA CRU

CMIP6 Model Outputs

import xarray as xr

def load_cmip6_data(model: str, experiment: str, variable: str,
                     member: str = 'r1i1p1f1') -> xr.Dataset:
    """
    Load CMIP6 model output from a local or cloud archive.

    Args:
        model: Model name (e.g., 'CESM2', 'UKESM1-0-LL')
        experiment: SSP scenario (e.g., 'ssp245', 'ssp585', 'historical')
        variable: Variable name (e.g., 'tas', 'pr', 'tos')
        member: Ensemble member ID
    """
    # Using Pangeo cloud catalog
    import intake
    catalog = intake.open_esm_datastore(
        "https://storage.googleapis.com/cmip6/pangeo-cmip6.json"
    )
    query = catalog.search(
        source_id=model,
        experiment_id=experiment,
        variable_id=variable,
        member_id=member,
        table_id='Amon'  # Monthly atmospheric data
    )
    ds = query.to_dataset_dict(zarr_kwargs={'consolidated': True})
    key = list(ds.keys())[0]
    return ds[key]

Temperature Trend Analysis

Computing Global Mean Temperature Anomaly

import numpy as np

def compute_global_mean_anomaly(ds: xr.Dataset, var: str = 'tas',
                                 baseline: tuple = (1850, 1900)) -> xr.DataArray:
    """
    Compute area-weighted global mean temperature anomaly
    relative to a baseline period.
    """
    # Area weighting by latitude
    weights = np.cos(np.deg2rad(ds.lat))
    weights = weights / weights.sum()

    # Global mean
    global_mean = ds[var].weighted(weights).mean(dim=['lat', 'lon'])

    # Baseline climatology
    baseline_mean = global_mean.sel(
        time=slice(str(baseline[0]), str(baseline[1]))
    ).mean('time')

    anomaly = global_mean - baseline_mean
    return anomaly

# Usage
# anomaly = compute_global_mean_anomaly(historical_ds)
# anomaly.plot()  # produces a time series of temperature anomaly

Carbon Budget Analysis

Emissions and Remaining Budget

Track cumulative CO2 emissions against the remaining carbon budget for temperature targets:

def carbon_budget_tracker(cumulative_emissions_gtco2: float,
                           target_warming: float = 1.5) -> dict:
    """
    Estimate remaining carbon budget.
    Based on IPCC AR6 estimates.
    """
    # IPCC AR6 remaining budget from 2020 (GtCO2)
    budgets = {
        1.5: {'50pct': 500, '67pct': 400, '83pct': 300},
        2.0: {'50pct': 1350, '67pct': 1150, '83pct': 900}
    }
    budget = budgets[target_warming]
    remaining = {prob: val - cumulative_emissions_gtco2
                 for prob, val in budget.items()}
    # At ~40 GtCO2/year current rate
    years_left = {prob: max(0, val / 40) for prob, val in remaining.items()}
    return {'remaining_budget_GtCO2': remaining, 'years_at_current_rate': years_left}

result = carbon_budget_tracker(cumulative_emissions_gtco2=200, target_warming=1.5)
print(result)

Climate Visualization

Spatial Maps with Cartopy

import matplotlib.pyplot as plt
import cartopy.crs as ccrs

def plot_climate_map(data: xr.DataArray, title: str,
                      cmap: str = 'RdBu_r', vmin: float = None,
                      vmax: float = None):
    """Publication-quality climate map."""
    fig = plt.figure(figsize=(12, 6))
    ax = fig.add_subplot(1, 1, 1, projection=ccrs.Robinson())
    ax.coastlines(linewidth=0.5)
    ax.gridlines(draw_labels=True, linewidth=0.3, alpha=0.5)

    im = data.plot(ax=ax, transform=ccrs.PlateCarree(),
                   cmap=cmap, vmin=vmin, vmax=vmax,
                   add_colorbar=False)
    cbar = plt.colorbar(im, ax=ax, orientation='horizontal',
                         pad=0.05, shrink=0.7)
    cbar.set_label(data.attrs.get('units', ''))
    ax.set_title(title, fontsize=14)
    plt.tight_layout()
    return fig

Best Practices

  • Always report uncertainties: use multi-model ensembles and provide confidence intervals
  • Document data preprocessing steps for reproducibility
  • Use standardized calendar handling (cftime) for model outputs with non-standard calendars
  • Apply bias correction (e.g., quantile mapping) when comparing model outputs to observations
  • Follow FAIR data principles and cite datasets using their DOIs

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