Run experiment
Skill brycewang-stanford/Auto-Empirical-Research-Skills/skills/42-wanshuiyin-ARIS/skills/run-experiment
Deploy and run ML experiments on local or remote GPU servers. Use when user says "run experiment", "deploy to server", "跑实验", or needs to launch training jobs.From its SKILL.md
npx -y skills add brycewang-stanford/Auto-Empirical-Research-Skills --skill run-experimentAssembled from the repository path, not quoted from the project. Check it against their README if it does not work.
One thing to look at
- no licenseNo license file was found in the repository. Code published without one is not open source by default, so using it at work is a question for whoever answers licensing questions where you are.
SKILL.md
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Run Experiment
Deploy and run ML experiment: $ARGUMENTS
Workflow
Step 1: Detect Environment
Read the project's CLAUDE.md to determine the experiment environment:
- Local GPU (
gpu: local): Look for local CUDA/MPS setup info - Remote server (
gpu: remote): Look for SSH alias, conda env, code directory - Vast.ai (
gpu: vast): Check forvast-instances.jsonat project root — if a running instance exists, use it. Also checkCLAUDE.mdfor a## Vast.aisection.
Vast.ai detection priority:
- If
CLAUDE.mdhasgpu: vastor a## Vast.aisection:- If
vast-instances.jsonexists and has a running instance → use that instance - If no running instance → call
/vast-gpu provisionwhich analyzes the task, presents cost-optimized GPU options, and rents the user's choice
- If
- If no server info is found in
CLAUDE.md, ask the user.
Step 2: Pre-flight Check
Check GPU availability on the target machine:
Remote (SSH):
ssh <server> nvidia-smi --query-gpu=index,memory.used,memory.total --format=csv,noheader
Remote (Vast.ai):
ssh -p <PORT> root@<HOST> nvidia-smi --query-gpu=index,memory.used,memory.total --format=csv,noheader
(Read ssh_host and ssh_port from vast-instances.json, or run vastai ssh-url <INSTANCE_ID> which returns ssh://root@HOST:PORT)
Local:
nvidia-smi --query-gpu=index,memory.used,memory.total --format=csv,noheader
# or for Mac MPS:
python -c "import torch; print('MPS available:', torch.backends.mps.is_available())"
Free GPU = memory.used < 500 MiB.
Step 3: Sync Code (Remote Only)
Check the project's CLAUDE.md for a code_sync setting. If not specified, default to rsync.
Option A: rsync (default)
Only sync necessary files — NOT data, checkpoints, or large files:
rsync -avz --include='*.py' --exclude='*' <local_src>/ <server>:<remote_dst>/
Option B: git (when code_sync: git is set in CLAUDE.md)
Push local changes to remote repo, then pull on the server:
# 1. Push from local
git add -A && git commit -m "sync: experiment deployment" && git push
# 2. Pull on server
ssh <server> "cd <remote_dst> && git pull"
Benefits: version-tracked, multi-server sync with one push, no rsync include/exclude rules needed.
Option C: Vast.ai instance
Sync code to the vast.ai instance (always rsync, code dir is /workspace/project/):
rsync -avz -e "ssh -p <PORT>" \
--include='*.py' --include='*.yaml' --include='*.yml' --include='*.json' \
--include='*.txt' --include='*.sh' --include='*/' \
--exclude='*.pt' --exclude='*.pth' --exclude='*.ckpt' \
--exclude='__pycache__' --exclude='.git' --exclude='data/' \
--exclude='wandb/' --exclude='outputs/' \
./ root@<HOST>:/workspace/project/
If requirements.txt exists, install dependencies:
scp -P <PORT> requirements.txt root@<HOST>:/workspace/
ssh -p <PORT> root@<HOST> "pip install -q -r /workspace/requirements.txt"
Step 3.5: W&B Integration (when wandb: true in CLAUDE.md)
Skip this step entirely if wandb is not set or is false in CLAUDE.md.
Before deploying, ensure the experiment scripts have W&B logging:
-
Check if wandb is already in the script — look for
import wandborwandb.init. If present, skip to Step 4. -
If not present, add W&B logging to the training script:
import wandb wandb.init(project=WANDB_PROJECT, name=EXP_NAME, config={...hyperparams...}) # Inside training loop: wandb.log({"train/loss": loss, "train/lr": lr, "step": step}) # After eval: wandb.log({"eval/loss": eval_loss, "eval/ppl": ppl, "eval/accuracy": acc}) # At end: wandb.finish() -
Metrics to log (add whichever apply to the experiment):
train/loss— training loss per steptrain/lr— learning rateeval/loss,eval/ppl,eval/accuracy— eval metrics per epochgpu/memory_used— GPU memory (viatorch.cuda.max_memory_allocated())speed/samples_per_sec— throughput- Any custom metrics the experiment already computes
-
Verify wandb login on the target machine:
ssh <server> "wandb status" # should show logged in # If not logged in: ssh <server> "wandb login <WANDB_API_KEY>"
The W&B project name and API key come from
CLAUDE.md(see example below). The experiment name is auto-generated from the script name + timestamp.
Step 4: Deploy
Remote (via SSH + screen)
For each experiment, create a dedicated screen session with GPU binding:
ssh <server> "screen -dmS <exp_name> bash -c '\
eval \"\$(<conda_path>/conda shell.bash hook)\" && \
conda activate <env> && \
CUDA_VISIBLE_DEVICES=<gpu_id> python <script> <args> 2>&1 | tee <log_file>'"
Vast.ai instance
No conda needed — the Docker image has the environment. Use /workspace/project/ as working dir:
ssh -p <PORT> root@<HOST> "screen -dmS <exp_name> bash -c '\
cd /workspace/project && \
CUDA_VISIBLE_DEVICES=<gpu_id> python <script> <args> 2>&1 | tee /workspace/<log_file>'"
After launching, update the experiment field in vast-instances.json for this instance.
Local
# Linux with CUDA
CUDA_VISIBLE_DEVICES=<gpu_id> python <script> <args> 2>&1 | tee <log_file>
# Mac with MPS (PyTorch uses MPS automatically)
python <script> <args> 2>&1 | tee <log_file>
For local long-running jobs, use run_in_background: true to keep the conversation responsive.
Step 5: Verify Launch
Remote (SSH):
ssh <server> "screen -ls"
Remote (Vast.ai):
ssh -p <PORT> root@<HOST> "screen -ls"
Local: Check process is running and GPU is allocated.
Step 6: Feishu Notification (if configured)
After deployment is verified, check ~/.claude/feishu.json:
- Send
experiment_donenotification: which experiments launched, which GPUs, estimated time - If config absent or mode
"off": skip entirely (no-op)
Step 7: Auto-Destroy Vast.ai Instance (when gpu: vast and auto_destroy: true)
Skip this step if not using vast.ai or auto_destroy is false.
After the experiment completes (detected via /monitor-experiment or screen session ending):
-
Download results from the instance:
rsync -avz -e "ssh -p <PORT>" root@<HOST>:/workspace/project/results/ ./results/ -
Download logs:
scp -P <PORT> root@<HOST>:/workspace/*.log ./logs/ -
Destroy the instance to stop billing:
vastai destroy instance <INSTANCE_ID> -
Update
vast-instances.json— mark status asdestroyed. -
Report cost:
Vast.ai instance <ID> auto-destroyed. - Duration: ~X.X hours - Estimated cost: ~$X.XX - Results saved to: ./results/
This ensures users are never billed for idle instances. When
auto_destroy: true(the default), the full lifecycle is automatic: rent → setup → run → collect → destroy.
Key Rules
- ALWAYS check GPU availability first — never blindly assign GPUs
- Each experiment gets its own screen session + GPU (remote) or background process (local)
- Use
teeto save logs for later inspection - Run deployment commands with
run_in_background: trueto keep conversation responsive - Report back: which GPU, which screen/process, what command, estimated time
- If multiple experiments, launch them in parallel on different GPUs
- Vast.ai cost awareness: When using
gpu: vast, always report the running cost. Ifauto_destroy: true, destroy the instance as soon as all experiments on it complete
CLAUDE.md Example
Users should add their server info to their project's CLAUDE.md:
## Remote Server
- gpu: remote # use pre-configured SSH server
- SSH: `ssh my-gpu-server`
- GPU: 4x A100 (80GB each)
- Conda: `eval "$(/opt/conda/bin/conda shell.bash hook)" && conda activate research`
- Code dir: `/home/user/experiments/`
- code_sync: rsync # default. Or set to "git" for git push/pull workflow
- wandb: false # set to "true" to auto-add W&B logging to experiment scripts
- wandb_project: my-project # W&B project name (required if wandb: true)
- wandb_entity: my-team # W&B team/user (optional, uses default if omitted)
## Vast.ai
- gpu: vast # rent on-demand GPU from vast.ai
- auto_destroy: true # auto-destroy after experiment completes (default: true)
- max_budget: 5.00 # optional: max total $ to spend per experiment
## Local Environment
- gpu: local # use local GPU
- Mac MPS / Linux CUDA
- Conda env: `ml` (Python 3.10 + PyTorch)
Vast.ai setup: Run
pip install vastai && vastai set api-key YOUR_KEY. Upload your SSH public key at https://cloud.vast.ai/manage-keys/. Setgpu: vastin yourCLAUDE.md—/run-experimentwill automatically rent an instance, run the experiment, and destroy it when done.
W&B setup: Run
wandb loginon your server once (or setWANDB_API_KEYenv var). The skill reads project/entity from CLAUDE.md and addswandb.init()+wandb.log()to your training scripts automatically. Dashboard:https://wandb.ai/<entity>/<project>.
What ships with it
Read from the repository
Just SKILL.md. No reference files, no scripts.