Bib check

Skill brycewang-stanford/Auto-Empirical-Research-Skills/skills/29-quarcs-lab-project20XXy/dot-claude/skills/bib-check

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Install

npx -y skills add brycewang-stanford/Auto-Empirical-Research-Skills --skill bib-check

Assembled from the repository path, not quoted from the project. Check it against their README if it does not work.

One thing to look at

no licenseNo license file was found in the repository. Code published without one is not open source by default, so using it at work is a question for whoever answers licensing questions where you are.

What its author says it does

Copied from the file, not written here

Cross-checks citation keys in index.qmd against references.bib, reporting missing, orphaned, and duplicate entries. Use when verifying citations.

SKILL.md

1.5 KB, as published. Nobody here has run it

Audit Citations and References

Cross-check all citation keys in the manuscript against references.bib and report mismatches.

Steps

Read index.qmd and extract every citation key:
- Narrative citations: @key
- Parenthetical citations: [@key], [@key1; @key2]
- Ignore email addresses and @sec-, @fig-, @tbl- cross-references
Read references.bib and extract every entry key (the identifier after @article{, @book{, etc.)
Check for duplicate keys within references.bib (same key defined more than once)
Report three categories:

Errors — cited in manuscript but missing from .bib:
- List each missing key with the line number in index.qmd where it appears
- For each, suggest running /project:cite <key> to add the entry
Orphaned — in .bib but never cited in manuscript:
- List each unused key (informational, not necessarily a problem)
Duplicates — same key appears multiple times in .bib:
- List each duplicate with line numbers in references.bib
Print a summary: total cited keys, total .bib entries, errors, orphaned, duplicates

Error handling