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Literature

Skill BioTender-max/awesome-bio-agent-skills/skills/labclaw/literature

A curated collection of AI agent skills for biomedical research, covering genomics, proteomics, single-cell analysis, clinical AI, and protein design.From the repository description

Install
npx -y skills add BioTender-max/awesome-bio-agent-skills --skill literature

Assembled from the repository path, not quoted from the project. Check it against their README if it does not work.

One thing to look at

  • no licenseNo license file was found in the repository. Code published without one is not open source by default, so using it at work is a question for whoever answers licensing questions where you are.

SKILL.md

1.5 KB, 344 tokens by cl100k_base, as published. Nobody here has run it

Literature Search & Review

Overview

Comprehensive academic literature search and synthesis across 15+ sources.

Capabilities

  • Multi-database parallel search (PubMed, arXiv, bioRxiv, medRxiv, OpenAlex, Semantic Scholar, Crossref, DBLP, CORE, DOAJ, Europe PMC)
  • Web search via Agent-Reach (Exa semantic search, Jina Reader for any URL/PDF)
  • Social academic search (Twitter/X threads, YouTube talks, GitHub repos)
  • Structured literature reviews with citation networks
  • Knowledge gap identification
  • Hypothesis generation from literature analysis

Search Strategy

  1. Query optimization: Short, keyword-based queries (max 7 words). PubMed-friendly syntax.
  2. Multi-source fan-out: Parallel queries across all sources for maximum coverage.
  3. Deduplication: By PMID, DOI, then normalized title.
  4. Reflection loop: Evaluate coverage → identify gaps → generate follow-up queries.

Citation Rules

  • ZERO hallucinated citations. Every reference must come from real search data.
  • Unified article schema: source_type, title, authors, year, journal, url, doi, pmid, abstract.
  • Numbered references [1], [2], [3] — built only from retrieved articles.

Best Practices

  • Start broad, then narrow. First search finds the landscape; follow-up queries fill gaps.
  • Cross-domain search. The breakthrough paper might be in an unexpected field.
  • Check preprints AND published papers. Recent findings may only be on bioRxiv/arXiv.
  • Verify high-impact claims. Use Semantic Scholar's citation count to identify landmark papers.

What ships with it

Read from the repository

Just SKILL.md. No reference files, no scripts.

Keep looking

Skills are one crate of 325,949. Ordering is by how many stacks a row turns up in, so the top of any crate is what has actually been picked rather than what has the most stars.