Repurposedrugs

Skill BioTender-max/awesome-bio-agent-skills/skills/drugclaw/repurposedrugs

Query the RepurposeDrugs single-agent drug repurposing database. Use whenever the user asks about drug-disease repurposing associations, clinical trial phases for repurposed drugs, or wants to look up any entity (drug name, disease name, NCT ID) in RepurposeDrugs.From its SKILL.md

Install

npx -y skills add BioTender-max/awesome-bio-agent-skills --skill repurposedrugs

Assembled from the repository path, not quoted from the project. Check it against their README if it does not work.

One thing to look at

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SKILL.md

1.3 KB, 304 tokens by cl100k_base, as published. Nobody here has run it

RepurposeDrugs Query Skill

Search canonical drug-disease repurposing rows. Auto-detects query type by pattern:

Input Pattern	Detected As	Match Logic
`34567890`	PMID	exact on `pmid`
anything else	free text	substring on `drug` OR `disease`

API

Function	Input	Returns
`load_data(path)`	CSV path	`list[dict]`
`search(rows, entity)`	single entity string	`list[dict]`
`search_batch(rows, entities)`	list of entity strings	`dict[str, list[dict]]`
`summarize(hits, entity)`	rows + label	compact text
`to_json(hits)`	rows	`list[dict]`

Usage

See if __name__ == "__main__" block in example.py for runnable examples.

Data

Source: RepurposeDrugs normalized full-package output
URL: https://repurposedrugs.org/
Local file: repurposedrugs.csv
Columns: drug, disease, score, status, pmid
Path: resources_metadata/drug_repurposing/RepurposeDrugs/repurposedrugs.csv

What ships with it: 5 files

10.1 KB alongside SKILL.md, 4 of them executable

example.pyruns2.5 KB
__init__.pyruns162 B
README.md1.6 KB
repurposedrugs_skill.pyruns5.0 KB
retrieve.pyruns818 B