Repurposedrugs
Skill BioTender-max/awesome-bio-agent-skills/skills/drugclaw/repurposedrugs
A curated collection of AI agent skills for biomedical research, covering genomics, proteomics, single-cell analysis, clinical AI, and protein design.
npx -y skills add BioTender-max/awesome-bio-agent-skills --skill repurposedrugsAssembled from the repository path, not quoted from the project. Check it against their README if it does not work.
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Query the RepurposeDrugs single-agent drug repurposing database. Use whenever the user asks about drug-disease repurposing associations, clinical trial phases for repurposed drugs, or wants to look up any entity (drug name, disease name, NCT ID) in RepurposeDrugs.
SKILL.md
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RepurposeDrugs Query Skill
Search canonical drug-disease repurposing rows. Auto-detects query type by pattern:
| Input Pattern | Detected As | Match Logic |
|---|---|---|
34567890 | PMID | exact on pmid |
| anything else | free text | substring on drug OR disease |
API
| Function | Input | Returns |
|---|---|---|
load_data(path) | CSV path | list[dict] |
search(rows, entity) | single entity string | list[dict] |
search_batch(rows, entities) | list of entity strings | dict[str, list[dict]] |
summarize(hits, entity) | rows + label | compact text |
to_json(hits) | rows | list[dict] |
Usage
See if __name__ == "__main__" block in example.py for runnable examples.
Data
- Source: RepurposeDrugs normalized full-package output
- URL: https://repurposedrugs.org/
- Local file:
repurposedrugs.csv - Columns:
drug,disease,score,status,pmid - Path:
resources_metadata/drug_repurposing/RepurposeDrugs/repurposedrugs.csv